Detail


ID : CBF3_halleri

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Description
Sequence
ATGAGCTCAT TTTCTGCTTT CTCTGAAATG TTTGGCTCCG ACTACGAGTC TCCGGTTTCC TCAGGCGGTG ATTATAGTCC GACGCTGGCG ACGAGCTGCC CCAAGAAACC GGCGGGTCGT AAGAAGTTTC GTGAGACTCG TCACCCAATT TACAGAGGAG TTCGTCGGAG AAACTCCGGT AAGTGGGTGT GTGAGTTGAG AGAGCCAAAC AAGAAAACGA GGATTTGGCT GGGGACTTTC CAAACCGCTG AGATGGCCGC TCGTGCTCAC GATGTCGCCG CCATAGCCCT CCGTGGCCGA TCCGCCTGTC TCAATTTCGC TGACTCTGCT TGGCGGCTAC GAATCCCGGA ATCGACTTGC GCCAAGGAAA TCCAGAAGGC GGCGGCTGAA GCTGCGTTGG CTTTTCAATA TGAGATGTGT GATATATACG ACAACGGATC ATGGCTTCGA CATGGAGGAG ACGTTAGTGG AGGCTTTTGT GACGGCGGAA CAGAGCGAAG AATCGATTTA TATAGACGAG GAGGCAATGT TCGGGATGCC AAGTTTGTTG GCTAATATGG CCGAAGGGAT GCTTTTGCCG CTGCCGTCAG TACAATGGAA TCATAATTAC GATGTCGACG GCGATGATGA CTTATCGTTA TGGAGTTATT AA
Length652
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G25480.1
Descriptiondehydration response element B1A
TAIR curator summaryencodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.
Alias[ATCBF3][CBF3][DREB1A][C-REPEAT BINDING FACTOR 3][dehydration response element B1A]
Gene coexpression
MR
MR Locus Description
1 CBF1_halleri C-repeat/DRE binding factor 1
2 CBF2_halleri C-repeat/DRE binding factor 2
7.74597 Ahg949750 C-repeat-binding factor 4
8.83176 Ahg487335 DRE-binding protein 2A
10.9545 Ahg926394 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
11.0905 Ahg941255
11.6619 Ahg910871 Protein of unknown function (DUF761)
18.1659 Ahg472273 Dehydrin family protein
20.5913 Ahg485985 Regulator of chromosome condensation (RCC1) family protein
21.8174 Ahg920198 related to ABI3/VP1 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression