Detail



ID : Ahg473311

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473311|fgenesh2_kg.1__3265__AT1G30800.1
Sequence
AAGAATCCTA ACGAACTCAA AAAGATTCTC TCTCTTTCTG TTACAACTTC GCCGCCGATT TGATTCTCCG ATGGCTACCT CAGGCCATCT CCTTCTCTTC TTCCTCATCA CCACCGTCAC ATTCCTAACT TCCGCCGCTT CTCCAGCGTA TCTCACGTCG CAAGATCACC AACACGCCGA CAGAATCATC GAAGCAATGA TCGGAGCCGG AGATTTCCGT GACTGGGCCG CTGATTTCCT CTCCGCCGTC GATGACCAGT TAGGAATCCC TCTCTCCGCC ACCATTTTCG TCCCAAGCGA TTTCGACTCC GCCGATGTCT CCTCCTCCTC CACCACCGGC GACAATAATG CTTATCCCCG TCGTCTCTCC GTCGCTTACC ACATCGTACC TCAACGACTC TCGTTCACTG ATCTCCGTCT CTTGAAACCA CTCTCTCGTC TTCCGACTCT TCTCCCGGGA AACTCAATCG TCGTCACTAA CAACTCTGTT TCCGGTTATA CTCTCGACGG CGTTCTTGTC TCTGAACCGG ATCTTTTCCT CTCTTCTTCG ATCGCTATTC ACGGTGTTGC TTCGTCGCTT GATTTCTCAC GTTACGGCGA TTTTGGTACC GGTGATACTA CTTTAGCTGA TAGTCTCCGT CCATATCCTC ATCGCCGTCG TCGTCGTCCT CGTGGTGGAT CCAACAGTGA CAACAATCAA ACCTCTGTTT CTGCATCCAC TATACATTAC TCAACTGGCT CGTTCTTGCT TCCATTGGCG GCTCTGACTT TGTTCTGATT TTTCAAGATT TTGTGAAATT CTGCACATAA TGTAAAGTTT TTCACATTAA GCAATAGCAA ATTTTCTTGA TTTGAAAGAA GAATTACTAT TATTACGACT TTTCTTTTCT TGTTTACACT TCACTAACGC TAAGGTTAGG TTATTTGTTC TTGCAGTGAT AAAAAGAACA AAAGATTATG AATAAATGCT CCAAAAAAAA AGAATCAGAA AGAAATTTAT TCTATCTATC T 
Length1011
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13199891.. 13201007
Download Sequence
A.thaliana
AGI-codeAT1G30810.1
DescriptionTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
TAIR curator summary
Alias[JMJ18][Jumonji domain-containing protein 18]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg312221 Pectin lyase-like superfamily protein
19.6469 Ahg341831
24.6577 Ahg471835 organic cation/carnitine transporter 3
26.8328 Ahg942130 Leucine-rich repeat (LRR) family protein
31.9374 Ahg337776 plant glycogenin-like starch initiation protein 4
32.3728 Ahg341711 phosphatidic acid phosphatase-related / PAP2-related
36.0555 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
40.025 Ahg894086
49.6387 Ahg472269 laccase 8
54.4059 Ahg477911 NOD26-like intrinsic protein 7;1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression