Detail



ID : Ahg342085

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342085|fgenesh1_pg.C_scaffold_3001848
Sequence
ATGGGAGATA CCGCAGAGGA TCAGAACGAC CGAGCTATGA TGGAAGCTGA AGGAGTCACG AGCTTCTCCG AACTTCTTAT GTTCTCTGAC GGCGTTCTCA GCTCCTCCTC CGACCACCAA CGTGAGGGTA ATGTCGGCGA TCGTGGAGAA GACAGCTTGG GTTTTGTATT CTCCGGCAAA ACTGGCTCAA GAATGCTCTG TTTTAGCGGA GGATATCAAA ACGACGACGA GTCACTCTTC CTAGAACCTT CTGTTCCCTC CTTGGGAGTC TCTGTTCTTG ACCCTTCATG CATTAAGATC GATTCCAAGA ACTCAAACGA CGCGTGTACG GTCGATAAAT CACCTAAATC ATCAAACAAG AAGAGAACCG GAACGGGTAA TGGGCAAGAG CCAGATCAAA ATCGAAAACC GGACAAGAAA TGCAAGCGAA ATCAGGATAA ATCATCAGTT GGAATTGCAA AGGTCAGGAA AGAAAGGTTA GGGGAAAGAA TTGCAGCGTT GCAGCAGTTG GTTTCTCCAT ACGGCAAGAC AGATGCAGCT TCTGTGTTGC ATGAAGCGAT GGGTTACATC AAATTCTTAC AGGATCAGAT TCAAGTCCTT TGCTCTCCTT ATCTAATCAA CCATTCTCTT GACGGTGGAG TTGTCACCGG AGATGTAATG GCGGCGATGA AAGCGAAAGA CTTGAGAAGC AGAGGATTAT GTCTAGTACC TGTCTCATCC ACCGTACACG TGGAAAACTC CAACGGTGCT GATTTCTGGT CACCTGTTAC TATGGGTCAC ACTACGTCAC AGTCACTGCC TCACGGATTT TAA 
Length813
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7944925.. 7946486
Download Sequence
A.thaliana
AGI-codeAT3G19500.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.1929 Ahg936611 P-glycoprotein 17
47.244 Ahg473652 C2H2 and C2HC zinc fingers superfamily protein
47.9479 Ahg476726 SKU5 similar 18
50.8331 Ahg341402 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
55.4527 Ahg919859 P-glycoprotein 10
56.107 Ahg351609 Protein of Unknown Function (DUF239)
63.6003 Ahg490208 transposable element gene
74.2698 Ahg917591
82.45 Ahg931870 vernalization5/VIN3-like
83.4026 Ahg950934
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression