Detail



ID : Ahg342633

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|342633|fgenesh1_pg.C_scaffold_3002396
Sequence
ATGACGCTCA TGTCTGATCT TCCTTGGGAT TTGGTAAAGG AGATACTTTC TAGGACTTCT ATAACTTCTC TCAGAGCGAT TGGATCCACT TGCAAACGAT GGAACACTCT ATCCAAAGAT GAGAGCTTCA CAAAGAAGCA CCTTGGTAAA GCAACCAAAG AGTTTCTGAT GAACATGACT TGTGAAAATG ATTATGAATC TGATCTGGTT TCACCTACGA GATTCAATCT CCAAAACATC AAAGATTTGC CATCATCTCT AAAGAAGATA GGTAATAATA ATATGCTTTG CCCAGTCCAG ATACTTAGTA TCTATAGTTG TGACGGCTTA TTGTTATTAG TCACTGCTGA TAACTTGGGG CTGGACCAGC TGGTGGTATG GAACCCGTAT TTGGGTCAAA CCAGATGGAT CGAAACCAAA ATCCTTCAGT ATGGACGGTA TGCTATAGGA CGGTATGCTA TAGGATATGA TAACAAGAAG AACCACAAAG TCTTGAAGGT GTTCTTTTGG TCTGATATAA AGCCCCAAAT CTACGATCTT AACTCTAATT CGTGGAGGGT TCTTGGTATC ACTTGTAAGT GTTACTCTTC GTTAGAAAAA GGCAGAGGCG CGTCCCTGAA GGGAAATACT TACTTTGTTG CAGAGAATGA GAAAAAAATA TTCTGTTTTG ATTTTACAAC GGAAAGATTT GGACCTTGTT TGCATCTGCC CTTTGATTTT GTTGGTACGG ATGTGACTTT ATCTTGTGTT AGAGAAGAGC AACTTGCGGT ATTTGCTCAT AGCTGCGTGA CAGGTACATA TAAGATGGAG ATATGGATTA CAACTAAGAT TGATCCCAAT GCAGTGTCGT GGAGCAAATT CTTTAAAGTT GAAGTTCAAA TTGATGGTTA TTATAATCTT TTTCTATACC AGTTTGAAGT TCAAAGTTTT TTCATTGACA AGGAGAAGAA AATAGCAGTG GTTAGTGGTA TAGACGACTG TGACATTTTG GGCTACGACA AATCTATCGT GGTGGGAAAG GATGGGTACT TCGAAAAAAC GAATCTCGGA TATGTGTTCT CTTATGTCCC AAGTTCGGTG CAGATCCAGT AA 
Length1092
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11247009.. 11248100
Download Sequence
A.thaliana
AGI-codeAT1G59680.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias[EDA1][embryo sac development arrest 1]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg919261 cation/H+ exchanger 23
20.7846 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
36.1248 Ahg342232 Nse4, component of Smc5/6 DNA repair complex
41.3521 Ahg951224
44.6766 Ahg898863
44.6766 Ahg941987 Plant invertase/pectin methylesterase inhibitor superfamily protein
46.9574 Ahg334132 Aluminium activated malate transporter family protein
53.4416 Ahg930204 UDP-Glycosyltransferase superfamily protein
57.6541 Ahg358371 Pectin lyase-like superfamily protein
61.7333 Ahg944537 Glycosyl hydrolase family 10 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression