Detail


ID : Ahg919261

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919261|scaffold_100542.1
Sequence
ACCAGCCATC GTAGGAGGAG ATGTCTTCCG GAGCCCCCCT TAATGTGACG AATCCTAGCT ATGATATTGA GATATCGCGT TTTGGAAAAA TTGTGTGTTA TGATCAAAGT CTTCTCTTTG AGAAGAGAGA ACAAAAGGGA TGGGAGAGCG GAAGTACGCT CGCCTCTTCC CTTCCGTTCT TCATAACGCA ACTCTTTGTC GCGAACCTTA GCTATCGCGT CCTCTACTAT ATAACCCGAC CCTTTTATCT TCCTCCTTTC GTAGCTCAAA TCCTCTGTGG ATTATTATTT AGCCCAAGTG TGCTTGGGAA CACACCTTTC ATAGTCACCC ATGTATTCCC CTACAGATTC ACAATGGTTC TTGAGACATT CGCAAACTTA GCTCTTGTCT ACAACATCTT CCTCCTTGGT CTAGGGATGG ACCTGAGGAT GGTGCGGATC ACCGAGCTCA AACCGGTCAT CATCGCCTTT GCGGGGCTTC TTGTTGCTTT ACCTGTTGGT GCCTTTCTTT ACTATCTCCC GGGAAATGGC CATCCAGACA AGATCATCTC TGGTTGCGTC TTCTGGTCTG TCGCGCTAGC CTGTACCAAC TTCCCTGACC TGGCAAGGAT CCTTGCGGAT CTTAAGCTTT TGCGGTCCGA TATGGGCCGT ACGGCCATGT GTGCAGCCAT TATCACTGAT TTGTGCACAT GGGTCCTCCT CGTTTTTGGG TTCGCTTCTT TTAGCAAAGC AGGGACATGG AACAAATTTA TGCCGTTCGT GATAGTCGTC ACCGCAATCT TCGTCCTCCT CTGCATATTT GTGATCCGTC CGGGAATAGC ATGGATCTTC TCCAAGACCG TGAAGGCAGG TCACGTCGGA GACACCCACG TTTGGTTCAT TTTAGGAGGT GTGGTCCTAT GCGGCCTGAT CACAGACGCA TGCGGGGTCC ACTCCATAAC CGGGGCATTC CTGTTCGGTC TCTCCATTCC GCACGACCAC ATCATACGTA ACATGATCGA GGAGAAGCTC CATGACTTCC TCTCCGGGAT CCTTATGCCT CTCTTCTACA TCATTTGTGG GTTACGAGCA GATATTGGTT TCATGCTCGA CTACACTGAC AAGTTCATGA TGGTTGTAGT CATTTGCTCT TCCTTCTTAG TAAAGATCGT GACTACCGTG GTCACCTCTT TATTCATGCA TATGCCTATG CGTGACGCAT TCGCTATCGG AGCCCTTATG AACACCAAGG GAACTTTATC GCTGGTCGTT CTTAATGCTG GTCGCGATAC TAAGGCGCTG GATAGTCCAA TGTATACTCA TATGACGATC GCGCTTCTAG TGATGTCACT AGTCGTCGAG CCTCTTCTCG CGGTTGCATA CAAGCCCAAG AAAAAACTTG TTCATTACAA GTACCGTACG GTCCAAAAGA TCAAAGGAGA AACAGAGTTT CGCGTCTTAG CTTGCGTCCA TATACTCCCC AATGTCTCTG GGATCACCAA TCTCTTACAA GTCTCAAACC CAACCAAACA ATCACCTCTC AGCGTTTTCG CCATTCACCT CGTGGAGCTC ACCGGTCGAA CCACGGCCTC GCTGCTAATC ATGAACGACG AATGCAAACC AAAAGCTAAC TTCTCGGACA GAGTCAGAGC AGAGTCCGAC CAAATCGCTG AGACCTTCGA AGCTATGGAA GTCAACAACG ACGCAATGAC GGTTCAGACC ATCACCGCAG TCTCTCCTTA CGCAACCATG CACGAAGATA TCTGCGCGTT AGCCGAGGAC AAGCGAGTTT GTTTCATCAT ATTGCCTTAC CACAAACACT TGACACCGGA CGGTCGGATG GGAGAAGGAA ACTCTTCTCA CGCTGAAATT AACCAAAACG TTTTGAGCCA CGCCCCTTGC TCGGTCGGGA TTTTAGTGGA CCGTGGTATG GCCATGGTCC GGTCTGAGTC GTTCCGTGGT GAAGCAATGA AAAGAGAAGT CGCAATGCTC TTCGTGGGTG GTCCAGACGA CCGCGAGGCG TTATCATACG CCTGGCGAAT GGTCGGACAA CACGTGATTA AACTCACTGT GGTAAGATTC GTCCCTGGAC GCGAAGCTCT AATCTCGTCC GGGAAAGTTG CAGCGGAGTA CGAGAGGGAG AAACAAGTCG ACGATGAGTG CATCTACGAA TTTAATTTCA AGACAATGAA TGATTCTTCC GTTAAATATA TCGAAAAAGT GGTCAACGAT GGTCAAGACA CGATCTCTAC GATCAGAGAA ATGGAAGACA ACAATTCTTA TGATCTTTAC GTTGTCGGAA GAGGATATAA CTCAGAAACT CCGGTGACTG CCGGTTTAAA CGATTGGAGC AGTAGTCCTG AGCTAGGCAC AATAGGGGAC ACATTAGCTT CGTCGAATTT CACAATGCAT GCTTCGGTAT TAGTCATTCA ACAATACTCT GCCACTAAAA GACAAGCTGC AGTCACAGCA GCCGCCGCAA CAACCGTTGT GGGAGCGGTC GCTGGTGCTA CCGTTAACAA TCAAGAACCC GTTGGTGGTG GGGCTAAGAC GCCTCGTGAT GCTGAGCCAT TTATGAAGTC TATGTATGAA GACGAAGATG AAGATGATGA AGAAGATCAT CAATATGGAA TTCATAGGTA ATGAGTTTTA TACATATATG TT
Length2642
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1877535.. 1880674
Download Sequence
A.thaliana
AGI-codeAT1G05580.1
Descriptioncation/H+ exchanger 23
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX23][CHX23][cation/H+ exchanger 23]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg342633 F-box associated ubiquitination effector family protein
10.247 Ahg492242 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
10.8628 Ahg486726 VANGUARD 1 homolog 2
19.4422 Ahg478120 Pectin lyase-like superfamily protein
22.7596 Ahg358371 Pectin lyase-like superfamily protein
26.3818 Ahg898182 cell wall invertase 2
26.8328 Ahg486501 uclacyanin 3
33.7639 Ahg914026 Plant invertase/pectin methylesterase inhibitor superfamily
34.8568 Ahg934805 Stress induced protein
36.7696 Ahg926787
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression