Detail



ID : Ahg470196

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470196|fgenesh2_kg.1__150__AT1G02370.1
Sequence
CAACCAAAAT GAATTTCCGT AATCTGATTA CTTCCGGTTC TCGCCTCGGC AAGAGATTCT GTGCAACAGT CTTTGCTCCG GCGTCGGCGA CTGGCGTCGT CGAAGCCTCT GTTTCTTCTC CAGCGGCGGC GAATGGCGTC GAAGCCTCTG TTCCTGCTCC GACGGCGGCG TCAAGGCAGC GAGAGTTGTA CAAGAAACTG TCTAAGCTTA GTGTGGCGGG AGGGACAGTG GCAGAGACGT TAAATCAGTT CATCATGGAG GGTATTACGG TCAGAAAAGT CGATCTCTTT CGCTGTGCTA AGGACCTTCG CAAATTCCGT CGACATCAAC ACGCTCTTGA GATCTTTGAT TGGATGGAGA AGAGGAAAAT GACATTTTCT GTCTCTGATC ATGCAATTCG TTTGGATCTA ATTGCAAAGG CTAAAGGCCT AGAAGCAGCT GAGAACTATT TCAACAACTT AGATCCTTCT GCAAAGAATC ATCAGTCGAC TTACGGGGCG CTCATGAACT GTTACTGTGT GGAACTTGAG GAAGAGAAAG CAAAGGCTCA TTTTGAGATA ATGGATGAGC TCAACTTTGT TAACAATTCG TTACCGTTTA ATAACATGAT GTCTATGTAC ATGAGGTTGA GTCAACCTGA GAAGGTACCT GTTTTGGTTG ATGCGATGAA GCAGAGGGGT ATATCTCCTT GTGGGGTAAC TTACTCTATA TGGATGCAGA GCTGTGGAAG TTTGAATGAC TTAGATGGAT TAGAGAAGAT TATTGATGAA ATGGGCAAAG ACAGTGAAGC TAAAACCACT TGGAATACTT TCTCTAATCT AGCAGCAATC TTCACTAAAG CTGGTCTTTA CGAGAAGGCG GAATCTGCGC TGAAATCTAT GGAGGAGAAG ATGAACCCTA ACAACCGTGA TTCCCACCAT TTTCTCATTA GTTTGTACGC TGGAATCTCG AAAGCTCCTG AGGTTTATAG AGTTTGGGAA TCGCTGAAGA AGGCTCGTCC TGAGGTCAAC AACTTGAGCT ATCTTGTCAT GTTACAAGCA ATGAGTAAAC TCGGCGACAT AGATGGGATT AAGAAGATTT TCACAGAGTG GGAATCAAAA TGCTGGGCAT ACGATATGAG GCTGGCTAAT ATCGCGATCA ACACGTATTT AAAAGGGAAT ATGTATGAAG AAGCAGAGAA GATTCTTGAT GGTGCCATGG AAAAGTCTAA AGGACCTTTC TCCAAAGCGA GACAGCTTCT GATGATCCAT CTGTTAGAGA ATGGTAAAGC GGATTTGGCT ATGAAGCATT TGGAAGCAGC AGTTTCTGAT TCCGCAGAGA ACAAAGGCGA ATGGAGCTGG AGCTCAGAGC TAGTCAGCTT GTTTTTCCTT AACTTTGAGA GAGCTAAAGA TGTTGATGGA GCAGAAGATT TCTGCAAGAT TTTGTCAAAT TGGAAACCTC TTGATTCTGA AACTATGAGC TTTCTCATAA AGACTTATGC AGCCGCAGAG AAAACTTGTC CTGATATGCG AGAGAGATTG TCTCAACACC AGATCGAAGT AAGCGAGGAG ATCCAAGACT TGCTTAAAAC AGTTTGTCCC TAAACTAAGT AATAATTGTT ATTTGAACAT TATGTTTAAA CTTGTGTCTC GTTTAGAGTT CAATCTTCTT GAATCTTGTT CCAGAAAACA AAGCTTAGCT CTTTTTATGT GTCGGTTACA TAT 
Length1703
Protein Sequence
Protein Residue
Map Locationscaffold_1: 558056.. 559945
Download Sequence
A.thaliana
AGI-codeAT1G02370.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.38083 Ahg316209 CCAAT-binding factor
16.7332 Ahg354097
17.8326 Ahg484880 histone deacetylase 3
19.7484 Ahg906059 Transducin/WD40 repeat-like superfamily protein
22.4499 Ahg313639 nuclear RNA polymerase A2
25.219 Ahg327675 pentatricopeptide (PPR) repeat-containing protein
27.7128 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
31.3688 Ahg470837 GTP binding Elongation factor Tu family protein
32.187 Ahg478626 CTP synthase family protein
40.0999 Ahg492264 fibrillarin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression