Detail



ID : Ahg473074

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473074|fgenesh2_kg.1__3028__AT1G28530.1
Sequence
GTCAATGGCT TCTGTTTCTA CTGCTTCTTG TTCTTCTTCT TCTTCACTTC TATTCCCCTC TCGAAATTTC GCATCTATTC CGTTGATTCC ACTCCGGAGA AGCTCTGTGT CTTTCATTCG CGGTTATTCT AAGAATTCGT CTACGGAGGA GGACATTCTC CGTTTCGTGG CGGAATCCGA TGGGAAGGCA CTTCCTTGTG TGCGGACGTA CGAGAATAAT TCAGCTCGGC TTAGTCTCGT TGGTACTGTT GCTTTTGATC AGGCTTTAAC CGCTGCTGCT GCTGACGGTG GTGAAGCCGC CGATGATCAT CTTCGTGAAA ATGTCCCTGT CATGGTGGTT GAGACTGTTT TTCCCGGAGG ATCTGATCCT AAAGCTACTG TGTCAACAAG ATTGTTCTTG CCTACTAAGA AAGTTAGAGA GCGAGCTAAA AAGCTGCGGC GGTCTCTCTC TGAGGATCTT TCTAGTGGAG ATTTGTCAAA GAACATACTT GCGATGACTT TTAGGCAAGT TGTTTTACGG CAGCTGTGGA ACTTTCAGCT GGTGTTATTT GCACCTGGAG CTGAAAGAGA AATGGGAGAA TTCGAAAACC CTCGAGAGCA GGTTTCTACA TCCTTCACTC TTAGCTCATC CGATGAACGG GTTATATCTG TTATTGCAGA AGTTATATGC ATCTCCGCTC TTCAAAGCAC CGAGAAGCAT TTCCTCGATG ATTATCTGGG AAAACTTAAA TTTCCCTTTT TAAAGTGGTT AAATAAACAC AAGAGGATTG CTTCAAGAGA CTGCTCTGTT GTCCTGCATA AGTTATTTGA TGATGAGCCG AATACCAACC TCTTGCTTGA ATACTACCAG TCAAGGAAGG AAAATTTCAA ACTTGAAGAC ACAAGGCAAA GAAGCCGGTG GTGGAACTTA TCTGCCAATT CTAAATTGGA AAAAATCGGT GGCCCCGGAT TTAGTAGTTG GGCAAGTGAA TATTTACCTG CATATCGACT AGAAATTGAT ACTATAATAC TTGCAGACTT AAAGCTTGAG GGCTGGAGAA AGTCCAGTGA AAATAAGTGG GAAGTTCTTC TAACTCACTC CCAAATGGTT GGATTAGCTG AAGCATTGGA CATATACTTT GAAGATATAT ATTCACTCCC CAGGAAACAG CTACCATGTG ATGTTCCTGG AAATTATGCA AACTTACCCA GTGAAAAGAG AGGATTGTCT TTGTTGAAAT TCATATCTGT CACCATGGCC AGTGGAATTC TTCTTCTTGC TGTGAGTGCT GCGGCCCAAT TCTGTCTTCC TCATAAAAGC GAGCGGAAGT ATCCTGGAAA ACGCCAAGAT ATTTTATGGT CAGAGAGTGA ATTATTATCT CATCAATCTT CAGATTTCTC TGAGTTGGAT TCATTCTGCG GATTACTCGT CAACAAGCTC AAGGATGCCT ACAGCTGGGT AGGGGAGATC ACACTGGAAA GTAGCATAGG TGCCTGGATT GGGGAAGTAC CTGATTACTT GAAAGAAACC AGCAGAGCTA AGTCTGTTGA AGATCACATC GTTACAAGCT CTTCTCTTCT GGAAAAACTC AATGAAGACG CAAAGGCAGC TGCGCAAGAT ATCGCTACGT ACCAGGTCGT TCTATCAGCT GAAGGTAAAA TCATAGGGTT CCAACCGACA AGCCGGGTGG CTGTGAATCA CTGGGCTGCT AATCCTTTAG CTAAAGAACT TTATGGTGGA AAAAAACTCA AGCCTGGGCT GATTGAGCCT GGTCTTAAGA GTCACCCTCC GAAAAAAGTA GTTGTGTTGG AATTGTTAAT GTCTGTGAAT TCAGATCGTC CTTTTGCATT GGTCAGACCA TTATTGCCAC AATAACCATA GCCAAGTTCC CGTCTCT 
Length1877
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11979730.. 11983114
Download Sequence
A.thaliana
AGI-codeAT1G28530.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.1494 Ahg938554 rotamase cyclophilin 2
28.1425 Ahg353700 DNA topoisomerase, type IA, core
35.8887 Ahg937581 Pentatricopeptide repeat (PPR) superfamily protein
38.7298 Ahg474417 Ribosomal RNA processing Brix domain protein
42.9884 Ahg476044 fructokinase-like 2
55.3173 Ahg495232 cleavage and polyadenylation specificity factor 160
56.7362 Ahg487806 Putative endonuclease or glycosyl hydrolase
58.3952 Ahg318480 Translation elongation factor EF1B/ribosomal protein S6 family protein
58.515 Ahg313639 nuclear RNA polymerase A2
59.1608 Ahg482051 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression