| Annotation |
|---|
| Description | jgi|Araly1|475099|fgenesh2_kg.2__229__AT1G62440.1 |
| Sequence |
GGAGCTGATG ATGATGATGA TATAAGCGGT GATGATATCA AAGTCGACCC GAGTCTCAAG TTTGAAAACC CGAGTCTTCG ACAAGCCTAC ATTGCTCTTC AATCATGGAA ACAAGCTATT TTCTCTGATC CTTTTAACTT CACTGCTAAT TGGAATGGCT CTGATGTTTG TTCCTACAAC GGTATCTTCT GTGCTCCTTC TCCTTCTAGT CCGAAAACTC GAGTTGTTGC GGGTATTGAC CTTAACCATG CGGACATGGC TGGTTATTTA CCTCGTGAGC TTGGTCTTCT CACTGATCTT GCTCTCTTTC ATCTCAACTC AAACCGCTTC TGTGGTGAAG TTCCTATCAC CTTTAAAAAC ATGAAGCTTC TCTTCGAGCT TGATTTAAGT AACAATCGTT TTGTTGGGAA GTTCCCTAAG GTTGTCTTGT CTTTGCCTTC CCTCAAGTTC TTGGATCTTC GGTACAACGA GTTTGAAGGT GGTATCCCTT CGAAGCTATT CGATAAAGAG CTTGACGCAA TATTCTTGAA TCATAACCGG TTTCGGTTTG GAATACCCGA AAACATGGGA AACTCTCCGG TTTCTGCTCT TGTTCTTGCG GATAATGATC TTGGAGGTTG CATTCCGGGA AGTATTGGTT TAATGGGAAA GACTCTTAAC GAGATCATCC TCTCTAACGA TAACTTAACC GGTTGCTTAC CACCGCAGAT TGGGAATCTC AAGAATGTGA CGGTTTTCGA CGTCAGTTTC AACCGTTTAA GCGGTCCATT GCCGTCAAGC ATTGGAAACA TGAAGAGCTT GGAACAGCTC AATGTTGCTA ACAATAGATT CACAGGAGTT ATTCCAAGCA GCATTTGTCA GCTCTCTAAC CTTGAGAACT TCACTTACTC TTCCAACTTC TTCACTGGTG ATGCTCCGAG ATGTGCGGCT CTTTCGGGAG ACAATGTGGC TGTTAATGGC TCGATGAATT GTATTGCTGG TAAAGAACGT CAAAGATCGT CTAAAGAATG TTCTTCTCCA GCCTCACGCC CTGTTGATTG TACTAAATTT GGATGCAACA ACTTTTTCTC TCCACCACCA CCGTCTTTTA AGATGTCACC CACCGTCCGA GTACTTCCTC CACCCCCTCC GTCTTCCAAG ATGTCGCCTA CATTTAGAGC AACTCCACCA CCGCCTTCTT CTAAGATGTC GCCTACTTTT AGAGCAACTC CGCCACCGCC TTCTTCTAAG ATGTCGCCTA CTTTTAGAGC AACTCCGCCA CCGCCTTCTT CCAAGATGTC GCCTTCCGTC AAGGCCTATC CTCCTCCCCC GCCACCGCCA AAGTATGAGC CATCTCCACC TCCTCCTTCT TCCGGAATGT CACCTTCCGT TAGAGCATAC CCTCCACCAC CACCATCTCC TCCTCCACCA TACATCTACT CATCTCCTCC TCTGCCGTCA CCATCTCCTC CTCCCCCATA CATCTACTCA TCTCCTCCAC CACCTCCGCC CGTAGTTAAC TGTCCACCCA CAACACAAAG TCCCCCACCG CCACCACCTC CAATATATGA GCAACCCCCT TCACCAAGGG AATACTATCC ATCACCTTCA CCACCTTACT ACCAACACAC ATCTTCAAGG CCACCGCCTA CTTACTACAG CCGCTCAATC TCCACCGGCA ACCGCCACCG GTCTACTATA GACCGGTTAC ACAATCTTCT CCTCCTTCAC CGTTTTACTA TTCACCTATT ACTCAAATCC ACCACCACCA CCGGTCTACT ATCCACCAGT TACACAAAGT CCACTTCCCC CACCAGTTTA TTATCCTCCG GTAACACAAA GCCCTCCACC ACCACCACCA GTCTACTATC CACCGGTAAC ACAAAGCCCT CCACCGCCAG CACCGGTCTA CTATCCACCG TAACACAAAG CCCACCTCCA CCGCCACCAC CAGTTGAGTA CCATCCACCG GCAAGCCCAA ACCAGTCTCC ACCACCACCG GAGTATCAAT CACCACCACA AAAGGGATGC AACGACAGTC ATCACTACCA AACACCAACA CCACCTTCTC CGCCGCCTCC ATCCTACGAC GACACACCTC TTCCGCCGAT CCGCGGTGTC TCTTATGCGT CCCCTCCTCC ACCATCAATC CCATACTACT AA |
| Length | 2142 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 1582474.. 1584696 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G62440.1 |
| Description | leucine-rich repeat/extensin 2 |
| TAIR curator summary | encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis. |
| Alias | [LRX2][leucine-rich repeat/extensin 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 35.6651 |
Ahg323966 | |
| 44.2719 |
Ahg920074 | |
| 47.0638 |
Ahg473807 | ECA1 gametogenesis related family protein |
| 47.9792 |
Ahg892274 | SGNH hydrolase-type esterase superfamily protein |
| 48.1248 |
Ahg323992 | hydroxyproline-rich glycoprotein |
| 64.3661 |
Ahg921700 | ENTH/VHS/GAT family protein |
| 69.2459 |
Ahg347223 | Proline-rich extensin-like family protein |
| 72.8286 |
Ahg479420 | Leucine-rich repeat (LRR) family protein |
| 84.2496 |
Ahg945592 | |
| 86.9943 |
Ahg320430 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|