Detail



ID : Ahg476416

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476416|fgenesh2_kg.2__1546__AT1G72790.1
Sequence
AACACATTAC AGCATCGTAA GCCAACCACT CCCAAGCTAA AAAGAAAGAG TATGGAAGAA GAAGATGGAG ACGCGTCTAC GCCGTTTTGG CTTCAATCAC GCCGCAATAA CACTTACTTC CGCCGCACTG CAAGTCTCGG CGGCCGTGCA ACCACCGTCG CCACTCAAAT ATTCTTCGCC GGGACAGCTG CAATCCTTAT AGTCTTCTTC ATTATCCCTC CTCTCTTTTC CTCTGTTTCA CAAGTTTTCC GACCTCATTT GGTCCGTAAA AGCTGGGATT ATCTCAACTT CGTTCTCGTC CTTTTCGCCG TCCTTTGCGG CTTCCTCAGC CGCAACACCA ATAATGACGA AACCAATCAT AACAAAGAAG AAGACATTAG TAACAAATTC TCGAACTCAC CTTCGATCAT CGATCGAGGA GGTCGTGTAT CTAACAGTGC CACGCCTCGT TATTGGATCG ATGATCGCGG TGGTGGCGGC GGTGATCAGA CGGTGTACAA GAGGTTTAGT AGATTACGGA GTGTTAGCTC GTATCCAGAT CTGAGGCTCC GGGAATACGA AGCCGATGAA CGGTGGAGAT TTTACGATGA TACACGTGTA AGTCAATGTC GTTACGAAGA TGTAGATCCG ATCTATCCAA ATCAAAGTTA CAGAAACTGG CAAGAGGAAG TTAAACCACC GCCGGAAGAT GTAGATCAAA CAGAGGACGG TGGTAATGAA GGAGGAGGAA AGGTCCATAG CGGCGGTTTT GAAACTGAGA AAGTTGAGGT CGTTGAGACG GCGGAAGCTG AAGTAGTTGA AGAGCTAACA GTGCCTTCTG CTCCGCCGTA TATTCCGTCT CCTCCGCCGT CTCCGCCACG TCCTCCACCA CCTAAGCAAG CGAAGAGGAA GACTAAAAGA GTGTACCAAG ATGTTCCTCC AAAGGAAGAG AATAATGAGA GAGGTGATTT TGTAGCGGCG ACGCCGATGA CTCCGATTCC ACCTCCGGCG ACTGTGTATC AAAAGAGCAA TAAACAGGAG AAGAAGAAAG GCGGAGCAAC TAAGGATTTT CTGATTGCGT TACGGAGGAA GAAGAAGAAG CAGAGACAAC AGAGCATCGA TGGACTCGAT TTACTCTTCG GCTCCGATCC TCCATTGGTC TATTCACCAC CACCGCCGCC TCCGCCTCCA CCACCTTTCT TCCAAGGGCT ATTCTCATCC AAAAAAGGTA AAGGCAAAAA AAACAATTCA AATCCACCGC CTCCTCCTCC TCCGCCACCA CCTGAACGGG GATATGAATC ACGCGCATCA ATGACGAAGA TTCGGAAAGC TCCGGTGGAA TCACGGACAT CTAAACCAAA TCCGCCAGCT AGAGTAACTC AATTCGTAGG CACAGGAAGC GAATCGCCAT TGATGCCGAT CCCGCCGCCG CCTCCTCCCC CGCCGTTTAA AATGCCGGCT TGGAAATTCG TGAAGCGTGG AGATTACGTC AGGATGGCTA GTGACATCAG CATAAGCTCC GACGAACCCG ATGATCCCGA CGTAGCTCAA TCAGCTGAAG GTAAGGTCGC CGCCGGGAGT ATGTTCTGTC CAAGCCCCGA CGTAGATACC AAAGCCGATG ATTTCATCGC CAGATTCAGA GCTGGACTCA AATTGGAGAA GATGAACTCT GTGAAAAGAG GGAGATCCAA TTTAGGACCC GAACCCGGAC TTAATGAATC CGGGTCTTAA TAAACGGGTA GTGGTTATAG GCCTAGCCCA AGCGTATAGT GGTTATTTCT TTTGGATTTT GCATTTTTGG ATTACACTGT GTTGGGTTTT TCCTACTTTT GTTTAATTTT CTTATACGTA ATTTTGTGGT TTTTATAGAT TTTAGCCCAT CTTAGGATTA AGATTAACCA AAAAAAGCTT TATACTTGAA ATGCAACTAG TTTTTCTTGT AATATTCTCC ATTTTTATGA GAACATATAG CTTTGAAAAA TATATTT 
Length1967
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14646720.. 14648801
Download Sequence
A.thaliana
AGI-codeAT1G72790.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
49.7494 Ahg924070 SKU5 similar 12
77.479 Ahg481446 transposable element gene
79.2212 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression