Detail



ID : Ahg477272

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477272|fgenesh2_kg.2__2402__AT1G79910.2
Sequence
TTTTTTTTGG AAAGGCAAAA TGTTTGATGG GCTGTTCAAA CCCAAGTTCT ATACGAAATG CAAGTCGTTG GTCAAGATAA CGAAGACAAG AGTAGACACG GTGAAGAGGA AGAAAAACTC GGTTTGCAAA TATCTCAAGA ACGACATTGT CGATCTTCTC AAGAACAGCC TCGATTACAA TGCATATGGC AGGAAGGGCT TATAGAGGAG AAAAGGAGGC TGGCTTGTTA TGAGTTTTTG GAGCAATTCT GCATCTGTGT TGCATCCAAT GTCTCTCTCT TACAGAAATC CAGCGGGTGC CCCGATGAGT GTCGCGAGGC CATCTCCTCC CTTGTATATG CAGCGGCTAG AGTCTCTGAA GTGCCTGAGC TACGCGACCT CAGATCTTTA TTTGCTGAGA GATACGGGAA CAAACTTGAA CAGTTTGTGA ATCCTGAGTT TGTAGAGAGA TTCAAAGCAG AGCCGCCGTC AAAGGAAATG AAGGTGGAGC TGCTGCAGGA AATCGCAAGA GAGTACTCCA TAAAATGGGA TGCCAAGTCT TTAGAGCAGA GATTGTACAC ACCAGCTCAT CATCATACGG AAACTGAAGA GCCAAAAACA GAGAAGTCCA AGGACCCCGA AACGAGAAGC AGCCTTTGGT TCCATGGCAG AGAAGACTCA ATGGATGACA GCAACAAGTC CATAATGAGT ACAAGCGAAG AAGACTCCAT GAGTACAAGC GGGAGTTGTG TGACTGGCCC GGAGGAGGAT CCTGAAACGA AACCCTTGTA CTACAGATTC ATGACTCCTG CTGCGCCATA CACCAAACCC AAAATCGAAA AACAGGAAAG CCTTCCGGAG AAGATGACCA AATCTGATCT CATGGACACC GAATCGCCGA GGGCCGGAAA AGCAAAGCCG AGATCAGTGA GACGAAGATT CGCAAACCCG ACCCCTGAAG CGGAAGGGGA AGCATTGAAA CAGGAGAGTA AGAAGAAGAA CATAATGAGA ACATCAGATT CGATGGGGAA AGCAAGCGGA GGAGAGGGGT TTAGGAGAAT GAGTCGTCGA ACAGCCTCGT GGCAGCATAA GCCCTCCAGC TGCGTCCCCG ATTTTGATGA GGTCGCCGCT CGCGTCGATG CCCTCTCACG AAATTGATTT TCTTTGTTGT TGTCGTCGTC CCAAACTCAC TCTTTTAA 
Length1178
Protein Sequence
Protein Residue
Map Locationscaffold_2: 18159872.. 18161789
Download Sequence
A.thaliana
AGI-codeAT1G79910.1
DescriptionRegulator of Vps4 activity in the MVB pathway protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.7631 Ahg896008 pectin methylesterase 38
24.6779 Ahg470353 Zinc finger C-x8-C-x5-C-x3-H type family protein
29.1204 Ahg319889 Galactose oxidase/kelch repeat superfamily protein
31.225 Ahg343192
35.0428 Ahg924070 SKU5 similar 12
65.4523 Ahg941608 Glycosyl hydrolase superfamily protein
66.7083 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
66.7458 Ahg342831
68.8767 Ahg947612
78.6066 Ahg333306 Disease resistance protein (TIR-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression