| Annotation |
|---|
| Description | jgi|Araly1|489025|fgenesh2_kg.6__2159__AT5G21150.1 |
| Sequence |
ACAAACAAAC CCTTTCTTCT TCCTCTCATA ATCTCTCTTT TTTTTTCTCG CTCGCTCGCT GCTCTGTTTA GGGTTTTTTC GTTCCTTCTG ATTTTTGTAC TCCAGAGATG GTTTCTAATG AACCGAATGG GAGTGGCGTA ATGCAAAAGG GAGGGTTACC ACCTCCACCA CCTGTCGTTC CAACAAATGT TGTCCCTGAA GTGGAGCCTG TAAAAAAGAA CATTCTTCTC CCAATGGCTC GGCCTAGAGG CAGTGGTTCC AAAGGACAGA AGATTCCTCT TCTTACTAAT CACTTTGGAG TCAAGTTTAA CAAAGCAAGC GGTTACTTCT TTCATTACAG TGTTGCTATC TCATATGAAG ATGGCCGTCC AGTGGAGGCT AAAGGTATTG GCAGAAAGAT TCTTGACAAA GTTCAGGAGA CCTATCAAAG TGATTTGGGG TCCAAATACT TTGCTTATGA TGGCGAGAAG ACTCTCTTCA CTGTTGGTGC TCTTCCCAGC AACAAACTTG ACTTCTCTGT TGTTCTTGAA GACATACCTT CTAGCAGAAA TAACGCTGGA AATGATACAA ATGATGCGGA TAGGAAAAGA TCAAGGCGTC CCAACCAATC TAAGAAATTC ATGGTTGAGA TAAGTTATGC TGCAAAGATC CCCATGCAGG CTATTGCAAG CGCTCTTCAA GGGAAGGAGA CAGAGAATCT TCAAGACGCT CTAAGAGTGC TGGATATTAT TTTGCGCCAG AGTGCAGCTA GGCAAGGTTG CCTCCTTGTT CGCCAGTCTT TTTTCCACAA TGACGTAAAG AACTTTGTAC CTATTGGTGG AGGTGTCAGT GGTTGCAGAG GGTTCCATTC AAGTTTCAGA ACTACTCAGG GAGGCTTATC CCTGAATATT GACACTTCAA CTACGATGAT TGTACAACCT GGACCTGTTG TTGATTTCCT GCTTGCAAAC CAGAACAAGA AAGATCCATA CGGTGTGGAC TGGAACAAGG CTCGTCGTGT TCTCAAGAAT CTGAGAGTTC AAGTTACTCT TTCAAATAGA GAATACAAGA TAAGCGGGCT AAGTGAACAC AGCTGCAAAG ATCAAATGTT TACATGGAGG AAACCTAACG ACAAGGGGGA ATTTGAGGAG GTTGAGATCA CAGTGCTCAA TTACTATAAA GAGCGTAGTA TTGAAGTGCG ATATTCAGGT GACTTCCCTT GCATCAATGT TGGTAAGCCG AAGCGTCCCA CTTACTTCCC CATTGAGTTC TGTAATCTTG TGTCTCTTCA GCGATACACA AAATCGCTTA CCAATTTTCA GAGGGCTGCA CTAGTAGAAA AGTCTAGGCA GAAGCCACCA GAAAGGATGG CCTCACTAAC CAAAGGTCTA AAGGACAGCA ATTATAATGC CGACCCGGTG TTGCAAGATA GTGGTGTCAG CATTATTACC AACTTCACCC AAGTTGAAGG CCGCATCTTA CCAACACCAA AGCTGAAAGT GGGGAACGGA CAGGACTTTA CCCCAAACAA CGGGCGCTGG AACTTTAATA GCAGGAAACT TGTTGAGCCA ACGACTGTTA CTAGATGGGC TGTTGTGAAC TTTTCTGCTC GTTGTGATAC AAATGCGCTT ATTCGCGACT TGATTAGATG TGGACAGTCA AAAGGAATTA ATGTAGAGCC TCCATTCAAG GATGTCATTA ACGAAAATCC TCAGTTTAGG AATGCACCAG CTACTGTGAG AGTAGAGAAT ATGTTTGAGC AGATAAAATC CAAACTCCCA GGGCAGCCTC TGTTCCTACT TTGCATACTC TCAGAAAGGA AAAACTCTGA TGTTTATGGC CCTTGGAAAA AAAAGAATCT TGTTGATCTT GGAATTGTGA CTCAGTGCAT TGCTCCCACA AGAGTGAACG ATCAGTATCT CACCAATGTT CTCCTGAAGA TAAATGCCAA GCTTGGTGGA TTGAATTCGC TGTTAGCAAT AGAGCGCTCA CCAGCAATGC CAAAAGTAAC GCAAGTTCCT ACTATCATTG TTGGGATGGA TGTATCCCAT GGTTCCCCTG GCCAGTCTGA TATACCATCA ATTGCAGCGG TTGTGAGCTC CAGACAATGG CCACTCATCT CAAAATATAA GGCATGTGTA CGCACACAAT CGCGCAAAAT GGAAATGATT GATAATCTCT TCAAACCCGT CTCTGGCAAA GACGAAGGAA TGTTCAGGGA GCTGTTGCTC GACTTTTACT ACAGTTCTGA GAAGAGGAAA CCAGAGCACA TCATTATATT CAGGGATGGT GTGAGTGAGT CTCAGTTCAA TCAAGTTCTT AATATTGAAT TGGATCAGAT GATGCAGGCA TGCAAGTTTC TTGACGAACA CTGGAATCCA AAGTTTACAG TGATCGTTGC CCAGAAGAAC CACCACACCA AGTTCTTCCA GTCGAGTCGC CCTGATAATG TTCCTCCAGG AACAATAATT GACAGCCAGA TCTGTCACCC ACGCAACTTT GATTTCTATC TCTGCGCCCA TGCCGGCATG ATTGGAACTA CAAGGCCAAC ACATTACCAT GTGCTGTATG ACGAGATTGG ATTTGCCACA GATGACCTTC AAGAACTTGT GCATTCTCTA TCCTATGTCT ACCAGAGGAG CACTACTGCG ATCTCAGTCG TTGCACCAGT TTGTTATGCG CATTTGGCAG CTGCACAGAT GGGAACTGTG ATGAAGTATG AAGAGTTGTC TGAGACTTCT TCGAGCCATG GGGGAATCAC CACACCCGGA GCAGTCCCTG TGCCTCCCAT GCCGCAGCTG AACGATAAAG TTGCAACCTC CATGTTCTTC TGCTGATGGA ACATGGCCCA GTCCCCACGG TAGCTGAGTT TATATGCTTT TGATGGAGAA CCAACGAACT TTTGTTTACT CTTCTCTGGG TTCGATGCCT CTTTTGTTTT TCGTCGACCC TTTAACATTG |
| Length | 2940 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8555511.. 8561786 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G21150.1 |
| Description | Argonaute family protein |
| TAIR curator summary | AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte. |
| Alias | [AGO9][ARGONAUTE 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg493181 | Protein kinase superfamily protein |
| 9.79796 |
Ahg943869 | glycosyl hydrolase 9B18 |
| 14.6969 |
Ahg477561 | |
| 14.8324 |
Ahg477039 | anaphase promoting complex 6 |
| 29.3939 |
Ahg486918 | |
| 33.1361 |
Ahg485999 | ROP (rho of plants) guanine nucleotide exchange factor 6 |
| 36.3318 |
Ahg338071 | GRAS family transcription factor |
| 40.1248 |
Ahg948807 | Helicase protein with RING/U-box domain |
| 46.1519 |
Ahg324130 | meristematic receptor-like kinase |
| 47.833 |
Ahg908084 | Zinc finger (C3HC4-type RING finger) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|