| Annotation |
|---|
| Description | jgi|Araly1|480300|fgenesh2_kg.3__3001__AT1G42570.1 |
| Sequence |
CAGCCAATCA CACGGTGTGG TTGTAATGCT CATATGACTT GCTACCTTCA GAAGACCGGA AAATATAAGG TTGTGTCTTT CAACCAGAAT CATAACCATG ATTTAGTGAA GACGCCTATG AAACATTTGT TGAAGGGAAA TCGGGTATTA TCTATCTCTC AAAAACAACA TGCAGATGAT GCCGAGATGT CAGGAATTTC AGCAAAATCA ACTGTTGAAA TGATGAGTAG AGAAGTAGGA GGGTAAGTAA ATCTGGGTTT TTTGAAGAAG GATTATCAAA ATTACATATA CCGAAAGCGA ATGGCAAAAA TGGAAAAGGG AGATGTTGGA GCTGTTTTGG AGTACTTTCA GAAAAATTTT TTTTATTCAA TGCAACTTGA TGAGGATGAT ATGATCACTA ATATCTTCTG GGCAGATGAT CGGTCTATAA GTGATTACAA TCTTTTTGGA GATGTCGTTT GCTTTGACAC AACTTATAAG ACCAATGACT ATGAAAGACC CTTTGCTCCA TTTGTCGGAG TCAATCATCA TAAGCAAACT GTTGTGTTTG GTGCTGCTCT CTTATATGAT GAAACCACTG AGTCATATAA GTGGCTTTTC GAGACTTTTC TTGGAGCAAT GTCTGGAAAA CAACCTGAAA CAATTCTTAC AGACCAATGT GCAGCAATGG CGAATGCAAT AGTGAAGGTA TTTCCTGATA CAAAGCATAG ATTATGTGTT TGGCATATTT ACCAAAATGC TGCAAAGAAG TTGAGTCATG TATTTCATGG AGCAGAACAA TTTGCCATGA ACTTTAGTAA ATGTGTATAT GACCATGAGG AAGAAGAAGA ATGGTTATTG GCATGGAGTA ATATGCTCCA GTAGCATAAA TTGACGGGGG ATAAATGGTT GAAGAATTTA TTTGAGCTGA GAGAAAAATG GGCAATGGTA TATGGACGTC ATACTTTTAC AGCAGATATG GTGAGCACAC AGCGTAGTGA AAGTATGAAT AATATTTTGA AAAAAATACT TGAAGCATAG TTATAACTTG TTGTGCTTCT TTGAACACTA TGAGAGAGTG TTGGAGGATC AACGATATAA AGAATTAGTT GCTGACTTCA ATATGATGCA TACCTCGCCG GTATTATGTG CTACTGTAGA GATGTTGCAA CATGCAGAGG AAGTGTATAC ACCAGAAGTT TTTAGCTTGT TCCAGAAGCA ATTCATAGTT ATCGGTGATT ATGTTGCCAA AAAGGTTAGT AAGTCTGAGA TGGTGTATGA ATACAATGTA TCTTATCGAG GTGTAGCACG AGAGCATTTG GTTAATTATG ATGCTGCAAA CGAGACAATA CATTGTGGTT GCAAGAAGTT TTCTTTTGCT GGGATTTTAT GTCGTCATGC ATTGAAAGTG TTGGACAAGA AGAATGTTAG AAGAATTCCA TCTACTTACA TTCTAAATCG ATGGAGTAAA GAGGCAAAAG CACGAAACAT ATCTTATTAT CATTCAGAGT CACCTAATGA AACAGTCAAG CAATCGATTG GAAAGCGATA TAGCCATATA TGTCATACTT TCCGTGAGAT TGCATATGTT GCTGCTGATC ATATAGAAAT GACATTGTGT GCAAA |
| Length | 1605 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 17026359.. 17027978 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G08596.1 |
| Description | transposable element gene |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg946730 | |
| 16.9706 |
Ahg358487 | Protein with RING/U-box and TRAF-like domains |
| 24.98 |
Ahg904884 | RNA-binding protein |
| 25.2785 |
Ahg936150 | F-box family protein |
| 35.5949 |
Ahg334132 | Aluminium activated malate transporter family protein |
| 41.8808 |
Ahg493034 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
| 45.2106 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 47.5605 |
Ahg914348 | Regulator of Vps4 activity in the MVB pathway protein |
| 47.7493 |
Ahg497075 | transposable element gene |
| 48.1664 |
Ahg921560 | FBD, F-box and Leucine Rich Repeat domains containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|