Detail



ID : Ahg480534

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480534|fgenesh2_kg.3__3235__AT2G19380.1
Sequence
ATGGTGTGGT TTCAGTGCGA AGATTGTGGC GAGAGTCTGA AGAAGCCAAG GCTCTCGAGG CACTTGCGTA TGTGCACTGC CACCAAGTTT TCTTGCATTG ACTGTGGAAA CATGTTTGGG CAAGATAGTG TTTACTATCA TAATCAATGC ATCACCGAGG CTGAGAAGTA TGGTCCAAAG GGGCTATCTA ATGGCGAAAA TTCGAAACAA AAGCACGATT TCGATATAAA TACCGAGTTA TACAAGAGTC CTTCATGGTT TTGCAGCTTA TGTAATGCAA ATATGACCTG CGAGCAGGAT TATTTTGCCC ATGTCTATGG AAAGAAACAC CAAGAGAAAG CAAATGAGGT TGCTGATATG GACTACTCTA AACAACAATC TGAACAACCA CCAGTTGACA AGCACAACTT AAAACAACAA CCCGACTTTG ATATATATGT CGGGTTATCA AACCACTATC CATGGTTCTG TAGCTTGTGT AACATAATGG CTACCAGCCA GCAGACTTTG TTATCACATG CCAATGGGAA GAAACACCGA GCTAATGTCG AATGGTTTGA TGCTGAACAA CAGCAACGAC AAGTAACACA ACATTCCAGG ATGGACAACT CAAAACAACA GATCGAAGTC GATATAAATG TTGGGTTATC CAATTGTTAT CCATGGTTTT GTAGCTTGTG TAACGTGAAG GCTACATGCC AGCAGAATTT GCTATCCCAT GCCAATGGTA GAAAACACCG AGAAAATATC GAATTGTTTG ATGCTACACA ACAACAACAG TTAGAAAAAT CCTCAGTGGA TAAGAAGGAT ACAATTGAAA ATGCTTCTGA TGGTAATTCC GAACAGAAGA GAGTAGATTT GCTTGTCTCA TCAGGTGTTG CAAATGGATA TCCTCAGGCC GGCAAAAAGA GAAAGCTAGA GACTTTCGAT GAAACACGGA ACAGGGAGGT AGTTCAGGCC GAAGAAGCAG AAGGAGGGGG TGAGAAAAAG CAAGAGAATA AGAAGAAGGG AAAGAAGGAA AAGAAGCAGA CTATGTCAGA CTCTGATTTC GAGTATGACA AGGAAGATAT CAAGCAGCTG TTGGTATCTT ACTCGAAGGA AGAGCTTGTG AACCTCATAT ACAAGACTGC TGAGAAGGGT TCTCGATTGA TCTCTGCCAT CCTTGAATCG GCTGACCGTG ACATCGCTCA GCGCAATATA TTTGTGCGTG GCTTTGGATG GGACACAACG CATGAGAACC TCAAGGCGGC GTTTGAGACT TATGGGGAGA TAGAGGAGTG CTCGGTGGTC ATGGACAAGG ACACGGGAAG AGGTAAAGGG TATGGGTTTG TGCTGTTCAA GACGCGGAAA GGAGCAAGAG AGGCATTGAA AAGACCGGAG AAGAGGATGT ACAACCGCAT CGTGGTATGT AATCTAGCAT CAAAGAAGCC GTCTGGGGCT GGAAAGGAGC AGGATATGGT TGAACCGGTG AAGATTGATC TAACTCAGAT GGCCAATCAA AGTGAAGCAG TCTTGCCCGG TCCCGAACTG GGTCACGGAC ATGTACTCAA GAAGATGCAC CACCAGCAAC AGACTATAGA TATGTTCGGA CAGAACATGC CTTTTTACGG ACACTCTCAT CAGTTTCCTG GTTTTGATCC AATGTATGGT GCATTAAGTG GTCTACCAAA CTATGGTATG TTTGGCTCGG GTATGATGAT GAACCAAGGA TCGATGTTGC AGCCACCACC GAATCATTTA GGTATGGCAG GGCAATATTT TGGTGATGGG GGACATGCTT GGCATCAGAG GTAG 
Length1794
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19963403.. 19965922
Download Sequence
A.thaliana
AGI-codeAT2G19380.1
DescriptionRNA recognition motif (RRM)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.9642 Ahg494595
32.6803 Ahg488299 polyribonucleotide nucleotidyltransferase, putative
47.0106 Ahg489199 Protein of unknown function (DUF789)
56.116 Ahg920490 Double-stranded RNA-binding domain (DsRBD)-containing protein
59.4727 Ahg479629 RNA-binding (RRM/RBD/RNP motifs) family protein
68.4032 Ahg350409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
73.1163 Ahg478773 Ribonuclease III family protein
76.0395 Ahg492683 Pentatricopeptide repeat (PPR) superfamily protein
83.7854 Ahg897242 Protein of unknown function (DUF626)
88.3855 Ahg338905 DNA LIGASE 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression