Detail



ID : Ahg482587

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482587|fgenesh2_kg.4__1647__AT2G36120.1
Sequence
ACAACTAAAT CTTAAGTAGA AAGAGTGAAC ATGGCTAGTC ACAAAAATCT CTTCTTTCTA TGTTTCATAA TAGGTTTAGG GTTATGTTCT GCAAGACGAG CACTTCTCTC CTCCTCTGAA TCCGAGGCTG AAGTCGCTGC CTATGGCGTG AAAAGTGGTT TAAGTGTCGG TGTTGGTGTT GGTATAGGTG GTGGTGCTGG AGGAGGATCT GGTTACGGAG GTGGAAGCGG TGAAGGTGGT GGAGCTGGTG GGCATGGTGA GGGACATATT GGTGGAGGCG GAGGTGGTGG ACATGGTGGT GGTGCTGGCG GAGGAGGTGG TGGTGGTCCT GGAGGAGGCT ACGGAGGTGG AAGCGGTGAA GGTGGTGGAG CTGGATACGG AGGCGGAGAA GCTGGTGGGC ATGGTGGAGG TGGAGGAAGC GGAGCAGGCG GCGGTGGAGG AGGTGGCGGT GCACATGGTG GAGGGTACGG TGGTGGACAA GGTGGTGGTG CTGGAGGAGG ATATGGAGGT GGAGGTGCAG GTGCCGGTGG ATATGGAGGT GGTGGAGGCG GTGGAAATGG TGGTGGTGGA GGAGGAGGTT CTGGCGAAGG AGGAGCTCAT GGTGGTGGTT ACGGAGCAGG GGGTGGAGCT GGAGAGGGAT ATGGTGGTGG TGCAGAAGCT GGAGGACATG GTGGAGGAGG AGGAGTTGGT GGTGGTGCCG GAGGTGGAGG AGGAGGTGGT GGAGGTTATG CTGCTGCTTC AGGATATGGT CACGGTGGCG GTGCTGGTGG CGGAGAAGGA AGCGGTGGCT ATGTACCCTG AAAAAATATC TCTATGGAGC ATGACGGCCA TTGAGTGAAG TGTCATATCT CGTAAGGGAC TACTATATAT AGTTTCAAGA TATATAAATG TGGCAATAAA TAGAGTATTC CTTCGTATAA TAAGCCGTTA AAAGGCGGCT ATTGTTGAAG TTTTTAAATT GTACCAATAT TGTTGTAAGC TACTACGTGT GTGTCAAGTT TTTATAAATG GAGATCATAG TTGTTCCT 
Length1028
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16247615.. 16248786
Download Sequence
A.thaliana
AGI-codeAT2G36120.1
DescriptionGlycine-rich protein family
TAIR curator summaryEncodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects.
Alias[DOT1][DEFECTIVELY ORGANIZED TRIBUTARIES 1]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg341841 transposable element gene
8.48528 Ahg940106 proline-rich extensin-like family protein
9.79796 Ahg908192
10.247 Ahg355136
13.1149 Ahg931786 proline-rich extensin-like family protein
14.4914 Ahg323992 hydroxyproline-rich glycoprotein
16.1555 Ahg473807 ECA1 gametogenesis related family protein
21.2132 Ahg347223 Proline-rich extensin-like family protein
22.5832 Ahg905397
23.4521 Ahg949376 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression