Detail


ID : Ahg951308

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951308|scaffold_803195.1
Sequence
ACCCATTTCC TGAGAAAATC ATGCAATTCG CGTCTACCAA ATCACTCTTC CTCCGCCTCG CCGGTTTCTC TTCCACATCC GTCTTCAAGC CGCCTCGCGC GATCGCTGTT CTGGTCGCAA ATTTCTCTTC TTCTAGCTCG ATCTCCGGCC ACTTCACTTC TTTGAGGCGT CATCAATACG AAGAGGAGTC GCGGAGTGTT AGGGTTCATG TATGGTGGGA TTTCGAGAAC TGTCATTTGC CGTCGGGTGC GAATGTCTTC AAATTGGCTC AAACCATCAC ATCCGCCGTT AGATTCAGCG GAATCAAAGG ACCCATCACC ATCACAGCCT TCGGAGACTT AATCCAGCTC TCCAGAACTA ACCAAGAAGC TCTCTTTGCC ACTGGAATCA ATCTCACTCA TGTTCCTCAA GGTGGGAAGA ACAGTACGGA TAGATCTTTG ATTACAGATC TAATGTATTG GGTTTTACAG AATCCACCTC CTGCTCATAT CTTCCTTATC ACTAGTGACA GAGATTTCGC GAATGTGCTA CATAGATTGA GGATGAACAA TTACAACATT TTGCTCGCGG GGTACGAAGA AGGTACGCAT GGTGTATTGT GTAGTGCTGC TTCGATTATG TGGGATTGGG ATGCTTTAGT TAGAGGGAAA AATCCAACGG GTAAATATTA CAATCAGCCA CCGGATGGTC CTTATAATTC TTGGTATGGT CACTATAGAA CTCCTCTTCT TGACCCATTT GCCTCATCTT CCACCACTAC CAACAAGCAA ATATCTTGTA CTAGTGTGAA AACCATAGAG TTGGTTGAAT CGAATTCAAA TGCGACGAAT TCGGGTTCTT CTAAGGCTTG TCTTCCTATT CCGAAAGAAG TTGTTAAGCA GATTGGTTTG ATTTTGAGTT GGTATCCTAA GGGAGCACCC ATTACAGAAC TCCGTGAGCA GCTGAGAAAG AGGAAAGTAC ACTTAGATAG AGACTTTTAC GGATATAAGA GTTTTTCGAG GTTTCTGTTA TCTATGCCGA AGATCTTACA GGTTGTTCCA GTGGGAGATG GTATGTTTTC TATTCATGCT GTTACCCAGG GAATGAATAA CAAAGCCTCA TCACCGAATG TAAGTAGTGA GAATCACGAA GTTGTTAGTT TGGACAAGAT GTGTGAGGAT ATGAAACAGA ATGATGAAAA TGTCAAAGAG GAATCTCAAT CACAAGAGAA TTCTCAAGAG TCTGTTCAGG TAATTAGACA GATGGATGTT AAGGCAAAAG AGGAACCAGT TAAAACAACT CAGCTAGCTT TAACTGTTGT TGATGATGTT TCTCCTTCCG AGGAAAAAGA CGGATTTCTT AAGAAGCTAA ATAGACTATG GTTTGGTTCA CCTGAAATAG TGGAATTAGA GCATCTCGAA GAAAAGAAAC ATATTTCTGG AAATGGAGAC GAAGGGAAAG GAGTTGTTGG TGAAGAAAAA GTGGTGAATA CGGATTTAGA ATCTCGAATT GCATCTTCTA CCTCTAGTGA ATCTGCTGAG GAAGTTAAAG CAGACACTGA AGTTGGCAAC AAGAAATCTA AGAGTCCATG GCTCTTAAGT CGACTTCTGA GGAGATTCAC GTTTTCTTGG GGAGGAAATA TAGAGCTTAG CAATGCAACA GTAACTGGAC CTCAAGTAGA TGATGTTTTT GCTAAAGATT CTTTTTGGAA GGATATTGAA TCTTTCATTA ATTCTCCAAG AGGCTTCGTC CTTGTTTCTC ACTCAAGATC AAGAGAAGCA ATGGCTAAGA ATCTTAAGGA AGAAGGACCT TCATCTCTCA AACCGCTCAA TGTATCAAAA ATGCTTGATT TAGTATCAAT GTTAATATCA GAGAAGAAAT GGATCCAAGA GAATCCTTCT GATGCTCTAC CTTTTAGAGT AACTTGGTTC ACCGAGAAAA GCTCTTGTCT TAGCAACCCT CCTGCTACGG AGGGATTGAG ATCGATATTT GTGAATATGT CAAAATCATT GTGTGACGAA GCAAATGGTG AGAAAAAAAT CAAGGACGTT GGTATGAGCC AGAAACCTAA AGAAAGATTG AGAAGCCAGG TAATTGCGGA TTGTCATAAG CTGATAAAGA AGATAAGAGA GGAAAATCCT GGAGGTTATA ACATGAGTAA CTTCAAGAAA GACTTTTTGG TCAAATTTGG ATACCGCTTA GAACATCATA ACCTCGGTTA TCCGAAACTG CAGTCGTTGA TACAAATGAT CCCTGAGGCT AGGATTGAAT CAGGATACAT TGTTCCTTCG TCCACCCCGG TTCCATATGA GTCTGATTCA TTATTCGAAG ATCTTGGTCC AGTTTCCAAA AAGGTTCATG AGAATGAGTC ATCTGTTTCA GAGGAAGAAG AGTATAACTC AGAGACAGAC GAAGAAGCTT CATTAAAACA GAGCGGCGAG GAAAGGAAGA AGAAGAAGAA AGAAGATGAA ACAGAGTGCG ATTTACTACA AATTCTGGGT TCTTGGGACA CTGATAAGAA GCAAAAGAAG TCTGCAAAAA CTTTTGGTGA AGATAAGCTT GTTGAAGGAA TATTGTTAAG CTTGAGGAAG AAACCATCAG GTGACTCTAG GATTCAAGAT TGAAGAATGT TTAATTTAAC CGGG
Length2624
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20305889.. 20308699
Download Sequence
A.thaliana
AGI-codeAT5G64710.1
DescriptionPutative endonuclease or glycosyl hydrolase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg478332 sequence-specific DNA binding transcription factors
23.7487 Ahg328051 PLC-like phosphodiesterases superfamily protein
27.1662 Ahg476155 spermidine synthase 2
39.4968 Ahg492683 Pentatricopeptide repeat (PPR) superfamily protein
56.9912 Ahg474575 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
61.6441 Ahg483781 cytokinin response factor 5
77.666 Ahg481070 pentatricopeptide (PPR) repeat-containing protein
86.6314 Ahg939759 heat shock transcription factor A3
90.3881 Ahg927275 mechanosensitive channel of small conductance-like 6
97.2111 Ahg330454 SGF29 tudor-like domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression