Detail


ID : Ahg890555

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890555|Al_scaffold_0007_2541
Sequence
ATGAAACCTC GCTTTTCTCA TAATGCCTAC TTTTTAGCTC GCTATTCACA TCTCCGTCGC TTCCACCATA GTCATCGTCG AACTTTCAGC TCTTTTCTCA ACAATATCCG TTCGAATTAT TACGGCACTA GCGCTTCGTC TCTCGGCGGC AGCAGCGGAG CCGGAGGCGG AGGTGGTGGA ACTGGAGATT CCAAAGGCAA TGCTTTTCTT TTGCCCGGAG CAACAATGGC TACTATCCTT ATGCTTGGAG CTCTTCATGC CCGCCGACTC TATGAAGACA AGAAGATCGA AGAGAAACGG GAAAGGGGAA TTGAGCTTGA GTTCCACCCA GATGTTAAAG CCTCGTTCCT TGGAATTCTG CCTCTGCGAT CAATCTCAAG AGCCTGGGGC TCCATAATGA GTCTGGAAAT TCCGGTGTGG ATGCGTCCGT ATGCTTATAA AGCATGGGCT CGAGCTTTCC ATTCAAATCT TGAAGAAGCA GCTCTGCCTC TTAAAGAATA TGCTTCGTTA CAGGATTTCT TTGTCCGTAG CTTGAAAGAA GGTTGCAGGC CTATCGACCC CGATCCTTGT TGTCTGGTTA GTCCTGTTGA TGGCACCATT CTAAGGTTTG GGGAGTTAAA AGGAAGTAGA GGGATGATCG AGCAAGTCAA AGGACATTCT TACTCAGTAC CGGCTCTTCT AGGAAATAAC TCTCTGCTTC CAATGGAACC TGAAGGTAAA GATGAGTCTG AGGAAGAAGC TGTTGGAGAT ACGAGCGACA AATCTTGGTT GAGAGTCTCT TTGGCATCTC CAAAATTACG GGAGAACATC TCAGCTAGTC CAATGAAGGG GCTCTATTAT TGTGTGATAT ACCTAAGACC AGGGGACTAT CATCGAATAC ACTCTCCGGT TGACTGGAAT GCAATGGTCC GTCGACACTT TGCAGGCCGG TTGTTTCCCG TGAACGAGCG TGCTACAAGA ACGATAAGGA ATCTCTATGT CGAGAATGAA AGGGTTGTGC TTGAAGGGAT ATGGAAAGAA GGTTTTATGG CACTTGCTGC TGTTGGTGCG ACCAACATTG GATCCATTGA GCTTTTCATT GAACCTGAGC TAAGAACAAA CAAGCCAAAG AAGAAGCTAT TTCCTACAGA GCCACCAGAG GAGCGGGTGT ATGATCCAGA AGGTCTTGGC TTAAAGCTCG AGAAAGGGAA AGAGGTAGGT GTATTCAACA TGGGATCTAC TGTAGTGCTC GTTTTCCAAG CACCAACCGC AAACTCACCC GAGGGTTCAA GCAGTTCCTC AGATTACAGA TTCTGTGTTA AACAAGGAGA CAGAGTCCGC GTTGGACAAG CATTGGGAAG GTGGAATGAG GAATAA
Length1356
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11117156.. 11119593
Download Sequence
A.thaliana
AGI-codeAT4G16700.1
Descriptionphosphatidylserine decarboxylase 1
TAIR curator summaryEncodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.
Alias[PSD1][phosphatidylserine decarboxylase 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg492569 homolog of separase
10.583 Ahg496765 homeobox protein 5
28.8097 Ahg924636 tetraspanin10
33.7046 Ahg492264 fibrillarin 2
43.4511 Ahg487806 Putative endonuclease or glycosyl hydrolase
47.3709 Ahg890951
50.6754 Ahg470154 NC domain-containing protein-related
54.827 Ahg919570 DNA polymerase epsilon catalytic subunit
61.4003 Ahg904629 pumilio 24
62.8808 Ahg494701 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression