Detail


ID : Ahg928019

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928019|scaffold_300476.1
Sequence
GAAGGAAACA GGGAATAAGA AATGAGAAGC GCCATGAAAA GAGTCCGGAA GGAAGAGACG ATCGAGAACA ATGGACAATG TTCTAAGAAA CAAGACGAAA GCCGCCATAA AAAAGATCCA TTTTCGATTC TTCCTCTAGA TCTGATAGTA GAGATTCTCT TCAAATTGCC AGCTGCCAAA TCCATAGCCA GGCTCGTCTT CGTTTCAAAA CTCTGGTCAT CTATAATCCG TGGCAAAGAC TTTACCAAGC TGTACTTGAC TCGATCTTTC ACTCGGCCGC GTCTTCTTTT CGTAGTCTTC TGTCACTACA TACCGACGCA GTTCTTACAA TCCTTCTCCC AAGAAGATCC ATCTTCTGAT CCTCATCATA GGGTAAACAT AAGTCCGCAT CGGTGTCGTT TGTGGTCTTT TTCTCCACCC GTCCGCGGCT TGATCTGCCG TCAAAATGAT ACTACCGTGA TCATTGGAAA TCCTAGCACG GGCCAGTTCT TAACTTTACC TAGAGTCAAA TCTAGGAGAA GAGGTTTATT CTCCTTTTTT GGATATGATC CTGTGAATGA TGAATACAAA GTGTTGTGCA TGACGGTACT ACAAGTTCGT CAAAGACGTG AATCACGAGT TGTGGCCGAG GAGCATCAAG TTTTCACTCT AGGAGCTAAA CAAAAATGGA GAAGGATCGA ATGTAACCAT GATCATCTTC CTCCTTCTTT AACTAAAGGG GTATGCATAA ACGGTGTTGT TTATTATTAT GCTTGGATCA AAAGTGAAGG ATCTTTGATA AGCTTTGATC TGATATCTGA AGTGTTTAAT GTCATTAAGT TACCTGAGGA TATCCAATGC CTAGTGAACT ACAATGGAAA GATAGCTTTA GCGAGTTTTT GTAAATTAGG TACACTTGAC CTGTGGGTTC TGGAAGATGC CAGCAAACAA GAATGGTCAA AAGTTTCTCT CTTGGTTCCT TCTTGGACAG ATTTAGTTGT TGATGAGAAT CTTTATTTCA AGGTCAGGGG TACACTTAGT ACCGGGGAGC TTATATTTAC ACCGACTCGT CCAGTTAGAC CGTTCTATTT TATCAGTTTC GATCTCAAGG AAAACAGTGC CAAAAAAGTT GTGGTTGAAG AAATTGGAGA TAACTTTGCT AGTCTCGAAA TCTATTTCGA TCATGTGGAG AGTCCTATGG TTCTGTCAAA TGTAAGTTAA TTATTTGGTG TTACCTTTCA T
Length1221
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1518363.. 1519572
Download Sequence
A.thaliana
AGI-codeAT2G13630.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.7596 Ahg904679
32.9393 Ahg925811 ROOT HAIR DEFECTIVE6
33.4365 Ahg342972
36.9459 Ahg927977 Kunitz family trypsin and protease inhibitor protein
40.0999 Ahg912628 Tetratricopeptide repeat (TPR)-like superfamily protein
41.6413 Ahg895515
46.2601 Ahg942539
46.6369 Ahg892531 LOB domain-containing protein 33
47.0744 Ahg495662 protein kinase C-like zinc finger protein
55.3715 Ahg341215 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression