Detail



ID : Ahg941015

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941015|scaffold_601559.1
Sequence
CAAATGGAGA TGAAAACGCG ATGATCAGGA GACAAACGAA CGACCGAACC ACCAATCGCC GCCGTTCAAA ACTATGGCAG AACTGCAAAA ATTTCCGAAC GTTGATGCAA ATTCACGCTT TTATGGTGGT TAATGGTCTC ATGTCTAATC TTTCTGTTGT TGGTGAGCTA ATTTACTCAG CTTCTTTGTC GGTTCCGGGT GCGCTTAAGT ATGCCCACAA GTTGTTCGAA GAAATTCCTA AACCAGACGT ATCTATTTGT AACCATGTGT TGCGCGGCTC TGCTCAGAGC TTGAAACCTG AAAAAACGGT TTCTTTGTAT ACTGAGATGG AGAAACGAGG TGTGTCGCCT GATAGGTATA CGTTTACGTT TGTTCTCAAG GCGTGTTCAA AGCTTGAGTG GAGAAGTAAT GGTTTTGCGA TTCATGGGAA AGTTGTGAGA CATGGGTTTG TGTTGAATGA GTATGTTAAG AATGCTTTGA TCCTTTTTCA TGCTAATTGT GGAGATTTGG GAATTGCAAG TGAGCTTTTT GATGATTCTG CGAAAGCTCA TAAGGTTGCT TGGTCTTCTA TGACTTCTGG GTATGCTAAG AGAGGGAAGA TAGATGAGGC GATGAGGCTT TTCGATGAAA TGCCTGACAA AGATCAGGTA GCTTGGAATG TGATGATTAC TGGTTGTTTG AAATGTAGGG AGATGGATTC AGCAAGAGAG CTCTTTGATA GATTTACAGA GAAAGATGTT GTCACTTGGA ATGCAATGAT CTCTGGATAT GTAAATTGCG GGTACCCTAA AGAGGCGCTA AGTATATTTA AGGAGATGAG GGATGCTGGT GAACACCCAG ATGTTGTGAC GATACTGAGT TTGTTATCTG CTTGTGCAGT TTTGGGAGAT TTGGAAACTG GGAAGAGACT TCATATCTAC ATCTTGGAAA CGGCTTCGGT TTCGAGCTCC ATATATGTGG GCACTCCTAT TTGGAATGCT CTAATTGACA TGTATGCAAA GTGTGGAAGC ATAGATAGAG CAATTGAAGT GTTTAGAGGA ATGAAAGATC GGGACTTGTC AACTTGGAAT ACTTTGATAG TTGGTTTGGC TTTGCATCAT GCGGAGGGAT CAGTTGAAAT GTTTGAAGAA ATGCAAAGGT TGAAAGTCTG GCCAAATGAG GTGACTTTCA TTGGAGTTAT ATTAGCTTGC AGCCACTCGG GGAGAGTTGA TGAAGGGCGT AAATATTTTA GCCTTATGAG GGATATGTAT AATATTGAAC CAAACATAAA GCATTATGGT TGTATGGTAG ACATGTTGGG ACGAGCAGGG CTATTAGAGG AAGCATTCAT GTTTGTGGAG TCGATGAAGA TCAAGCCTAA CGCTATTGTA TGGCGAACCC TTTTAGGTGC TTGTAAGATT TATGGGAATG TCGAGTTAGG GAAATATGCA AATGAGAAAC TGCTTAGTAT GAGAAAGGAC GAGAGTGGCG ATTATGTGTT GCTATCCAAC ATATATGCTT CCACAGGTCA GTGGGACAGT GTGCAGAAAG TAAGGAAGAT GTTTGATGAT ACAAGAGTGA AAAAACCGAC TGGAATTAGC TTGATCGAGG AAGATGATGA CAAATTGATG ATGAGATATT TACTCTCGTC CGAACCTGAG TCAAAATCAA GAAAACGAAT TAGTTAAGGT AAAAACCCAA CGCTTCATT 
Length1689
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5986969.. 5988656
Download Sequence
A.thaliana
AGI-codeAT5G15300.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.2173 Ahg477067 STRUBBELIG-receptor family 5
45.0555 Ahg930286 RNA polymerase Rpb7-like, N-terminal domain
50.3786 Ahg472839 Pentatricopeptide repeat (PPR) superfamily protein
52.0769 Ahg949876 calcium-transporting ATPase, putative
85.3229 Ahg922968 nucleolar protein gar2-related
89.4874 Ahg487715 IBR domain-containing protein
89.95 Ahg351855
94.8999 Ahg921207
96.478 Ahg470804 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression