Detail



ID : Ahg479911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479911|fgenesh2_kg.3__2612__AT3G24180.1
Sequence
CGCACGCAAA TCAAAAGCCA GACTTTAAAA CCACTTGCCA CCGTACGAGA AACCTTTCTC TGACGGTCGA TCCTCCGCTC GCCACGCCGC CGCCACGTCA GCAGTCTCCT CCATCAAAAT AGATTCCTAA CCAATTTTCG AAGATTCGAA TCCAATTCTT CTCCTTCTTC TGAGAAAATC TCATATTTTT GCGAATTTCT ACCGATTCGT CTGAATGAGA TGCGTTTTCA TTGTCACTTC CTTTAGGTTT TGAATCGGGG ATTGTTCCGA CTGAAACGGT GCCGTTTTAA TTCGCTGCAA ATGCTTGCCT GAGAAACACC TTTTGTTCTT TTATGTAAAT ACAAGTGTAG AGTCGAGAAT TTGAGTAGAG ATGGTGGGGG CAACTTTGTT TCACCGTAGA AAGCATTCAT GGCCGGCTGA GGAATTTATC AGTAGAAGTA CTCTGCAATT ACTTGATTCT GATAGTGCTG CTCCGCCACC ACACGCATGG AGGAGGAGAT TAAACTGCCA TGCCAATATC CTTAAAGAAT TCACTATTAC TTTTAGGGAA GCCATTAAAA TGGTACGCTT GGGGATACGA TTATGGTCTT ATGTCAGAGA AGAGGCCTCC CATGGAAGGA AAGCACCTAT CGATCCCTTC ACCAAAGAGA ACTGCAAACC ATCTGCATCC CAAGGTGTTC CACTCGGAGG AATGGGAAGT GGAAGCATAT CTAGGGGCTT CAGGGGTGAG TTTAAGCAGT GGCAAATCAC TCCCGGAACT TGTGATCCTT CACCTATGAT GTCTAATCAG TTTTCTATTT TTATTTCTCG AGATGGTGGA CACAAAAAGT ATGCATCAGT TTTGTCTCCA GGCCAGCATG GAAGTTTAGG AAAATCGCGT GATAAAGGTC TTTCTTCATG GGGCTGGAAT CTGAATGGCC AGCATTCAAC TTATCATGCT CTTTTTCCTC GGGCTTGGAC TATATATGAT GGTGAGCCTG ATCCAGAGTT AAAGATCTCC TGCCGGCAAA TATCTCCTTT TATACCAAAC AATTATCGAG ATAGTAGTCT TCCAGCAGCT GTTTTTGTAT ATACTTTGGT GAACACTGGA AAGGAAAGGG CAAAAGTCAG CCTCCTATTC ACATGGGCGA ATTCAATAGG TGGGACTTCA CATATGTCAG GGGGTCATGT GAATGAGCCA TTCATAGGCG AAGATGGGGT CTCTGGTGTC CTCTTACATC ACAAGACAGG CAAGGGAAAT CCTCCTGTTA CATTTGCGAT TGCTGCTTCT GAGACTCAGA ATGTTAATGT AACTGTTTTA CCATACTTTG GATTGTCTGA AGATAGTTCT TTTACAGCGA AAGATATGTG GGATACAGTG GAAAAGGATG GGAAATTTGA TCAAGAAAAC TTCAATAGCG GGCCAAGCAC GCCTTCATTA GCTGGAGACA CTATTTGTGC AGCAGTCTCA GCTTCGGCAT GGGTAGAAGC TCATGGCAAG TGCACTGTGT CTTTTGCTCT TTCGTGGTCA TCACCAAAAG TGAAATTTTC AAAGGGAAGC ACATATGACA GGAGATACAC TAAATTTTAT GGAACTTCGC CAAGAGCAGC GCTGGACCTT GTGCATGATG CACTGACAAA TTATAAGAGG TGGGAGGAAG ATATTGAGGC ATGGCAAAAT CCCATTCTCA GAGATGAAAG GCTCCCTGAG TGGTACAAGT TCACTCTGTT CAATGAGCTT TACTTTTTGG TAGCCGGTGG TACAGTTTGG ATAGACTCTT CTTCACTCAA TGCCAATGGG AATAGTCAGC ATCAACAATC GGGTTTAGGA AATTCAGATG GTATGGCGGG TGGACTCGAC ATCAATGATC AACGGAATGA CCTTGGTAAT GGAAACAGCG TTGGAGTAAA AAGCAATGAT GAAGTATCAG CTATTCATAA CCGGAATGGT TTATTTGTCG ACACTCGCCA TGTAGATGAT GGCGATGATG TTGGTCGGTT TCTGTATTTG GAAGGTGTGG AGTATGTGAT GTGGTGCACA TATGACGTGC ACTTTTACGC ATCATATGCG CTCCTTATGC TATTCCCAAA GATCGAACTA AACATCCAGC GGGATTTTGC AAAAGCTGTG TTGTCTGAAG ATGGGAGGAA GGTTAAGTTC CTGGCAGAAG GAAATGTGGG GATTCGCAAG GTCAGAGGTG CTGTTCCTCA CGATCTGGGG ATGCATGATC CGTGGAATGA AATGAATGCC TACAACATAC ATGACACAAG CAAGTGGAAG GATCTTAATC CAAAGTTTGT GCTTCAGGTG TATAGAGATT TTGCAGCTAC AGGGGATTAC CAATTTGGAA TAGACGTTTG GCCCGCAGTT CGTGCTGCTA TGGAGTACAT GGAACAGTTT GATAGAGACA ATGACGATCT AATAGAGAAT GATGGTTTCC CAGATCAGAC ATATGATACA TGGACTGTTC ATGGTGTGAG TGCATACTGC GGTTGCCTTT GGCTGGCTGC TCTTCAAGCT GCAGCGGCAA TGGCTCTCCA AATCGGTGAC AAATTCTTTG CAGAATTGTG TAAAAATAAG TTTTTGAATG CAAAGGCAGC AATGGAAACG AAACTCTGGA ACGGATCATA CTTCAATTAT GACAGTGGGG CAAGCAGCAA CAGCAAATCT ATACAGACTG ATCAGTTGGC GGGTCAATGG TATGCTGCAT CTTCAGGTCT GCCTCCAATA TTCGAGGAAT CTAAAATCAG AAGCACTATG CAAAAGATCT TTGATTTCAA TGTGATGAAG ACCAAAGGAG GCAAAATGGG TGCAGTAAAT GGGATGCATC CTGATGGGAA AGTGGATGAC ACATGCATGC AGTCGCGTGA GATATGGACA GGCGTCACTT ATGCAGCTGC AGCTACAATG ATCCTCTCTG GAATGGAAGA ACAAGGATTC ACCACTGCTG AGGGAATTTT TACAGCTGGC TGGTCAGAAG AAGGTTTCGG ATATTGGTTC CAGACACCGG AAGGTTGGAC AATGGATGGG CATTACAGGT CCTTGATATA CATGAGACCG CTTGCGATAT GGGGAATGCA ATGGGCATTA TCGCTGCCAA AGGCAATTCT GGACGCTCCT CAGATCAACA TGATGGACAG AGTACACTTA TCCCCAAGAA GCCGCAGATT CTCTAACAAC TTCAAAGTTG TGAAACACAA GGCTAAGTGT TTTGGCAATT CAGCATTAAG CTGTTCTTGC TAAATCATTC CGTCTTATTA TATATAACAT ACAAGTAACA TTCACATCTC TGATATGATT ATCGGAGTAA CTTATATAAA AAAAAGTAAA AAATGTTATT TAAGGAGAGG AATTAGCCGA CATGGTTCCT GAGTTGTAAT AAATAATAAC CTGAGAAGAA CAATTTGTGT TCTTCTTTTC TTCTGTTGGT TTATATTTAT TGGCTTAAAG AAAAGCCACG TAAGAGCATA TAAAACGGCA ACACCTACGT ACGCTTTATA GCGTTCAAT 
Length3489
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10625248.. 10632370
Download Sequence
A.thaliana
AGI-codeAT3G24180.1
DescriptionBeta-glucosidase, GBA2 type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg943470 cullin 1
10.4881 Ahg481550 ARM repeat superfamily protein
11.1355 Ahg943823 HEAT repeat ;HECT-domain (ubiquitin-transferase)
13.8564 Ahg931532 transportin 1
15.2971 Ahg942061 RNA recognition motif (RRM)-containing protein
20.1246 Ahg329104 dentin sialophosphoprotein-related
21.4942 Ahg472334 U5 small nuclear ribonucleoprotein helicase, putative
22.7156 Ahg472320 tonoplast monosaccharide transporter1
23.4947 Ahg480964 XAP5 family protein
24.0416 Ahg479191 ubiquitin protein ligase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression