Detail



ID : Ahg357025

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|357025|fgenesh1_pg.C_scaffold_8000812
Sequence
ATGGAAGCAA TGCGTTCTCT TCAGCACTTT CCCTCCTCCG CCATTCAACG ACGGCTCTCT CAGTTTAACA TCCACGATAA ACTTACCAGA CCCTCTTCTT GTCTTCCTCT TCGTGCTCAA AAGTCTGGAA TCACTGAAGG TTCCTCTGAT TCGGCATTGG AGGGTAAAGT AAGTGATCTC AAGATTAGTG AGCAAGAAGT GGGGATGTAC CAGAATGAAG TAGTTGAGAG TCAGGGTATT AGGATAAGGA GAAGACCACC TACTGGACCT CCATTGCATT ACGTTGGACC TTTTGAGTTC CGCCTCCAGA ACGAGGGTAA CACGCCTCGT AATATCTTGG AAGAGATCGT ATGGCACAAG GATAAAGAAG TTGCTCAGAT GAAAGAGAGG AAGCCTCTTT ATACCTTGAA GAAGGCTCTT GATAATGTTC CTCCTGCTAA AGACTTCATT GGTGCTCTTA GATCGGCTCA TCAAAGAACG GGGTTACCTG GTTTAATAGC TGAGGTTAAG AAAGCTTCTC CAAGCAGAGG CATCCTTAGA GAGGATTTTA ACCCTGTTGA AATTGCACAA GCTTATGAGA AGGGTGGAGC AGCATGTCTT AGTGTTTTGA CAGATGACAA ATACTTCCAG GTCATACCGT AA 
Length642
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10837320.. 10838312
Download Sequence
A.thaliana
AGI-codeAT5G48220.1
DescriptionAldolase-type TIM barrel family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
46.3249 Ahg484328 Amidase family protein
51.4976 Ahg472995 P-glycoprotein 13
63.0476 Ahg911029 Nucleic acid-binding, OB-fold-like protein
63.1031 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
68.1029 Ahg925447 RNA polymerase subunit alpha
76.3544 Ahg322443 DNAse I-like superfamily protein
82.994 Ahg473738
83.3307 Ahg939588 one helix protein
85.4868 Ahg950495 GTP-binding protein, HflX
86.4292 Ahg487375 ethylene-dependent gravitropism-deficient and yellow-green-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression