Detail



ID : Ahg470161

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470161|fgenesh2_kg.1__115__AT1G01140.3
Sequence
GAAGAAGAAA ATGAGTGGGA GCAGAAGGAA GGCGACGACG CCGGCGAGTA GGACGCGAGT AGGGAATTAT GAGATGGGAA GAACTCTAGG AGAAGGAAGC TTCGCTAAGG TGAAATACGC GAGGAACACC GTCACCGGAG ATCAAGCCGC TATCAAAATC CTCGACCGAG AAAAGGTCTT CCGTCACAAA ATGGTCGAAC AGCTTAAAAG AGAGATATCG ACAATGAAAT TGATTAAACA TCCAAATGTG GTTGAAATCA TTGAGGTTAT GGCGAGCAAA ACGAAGATCT ATATCGTTCT TGAGCTTGTC AATGGAGGTG AACTCTTTGA TAAAATCGCG CAACAAGGGA GGCTTAAGGA GGATGAAGCT CGGAGATATT TTCAGCAGCT CATCAATGCT GTGGATTACT GCCACAGTCG AGGTGTCTAC CACAGAGATC TCAAGCCTGA AAATCTTATC CTTGATGCAA ATGGGGTTTT GAAAGTCTCT GATTTTGGGT TAAGCGCGTT CTCACGACAA GTTCGGGAAG ATGGTTTGCT TCACACAGCT TGTGGAACGC CAAACTACGT TGCTCCTGAG GTTTTATCAG ACAAAGGCTA TGACGGTGCA GCAGCAGATG TCTGGTCTTG TGGTGTAATT CTCTTTGTGC TCATGGCTGG TTACTTGCCT TTTGATGAGC CAAATCTCAT GACATTATAC AAACGTATAT GCAAGGCCGA GTTTAGCTGC CCACCATGGT TCTCGCAAGG TGCCAAGAGA GTCATTAAGC GTATTCTCGA ACCCAACCCT ATAACCAGAA TAAGTATTGC AGAGCTACTA GAAGATGAAT GGTTCAAGAA AGGGTACAAG CCGCCATCAT TTGACCAAGA TGATGAGGAC ATAACCATAG ATGATGTTGA TGCTGCTTTT AGTAACTCCA AGGAATGTCT TGTAACAGAG AAGAAGGAGA AACCGGTATC CATGAACGCT TTCGAACTTA TCTCTAGCTC AAGCGAGTTC AGTCTTGAAA ACTTGTTCGA GAAGCAAGCG CAACTTGTGA AGAAAGAAAC GCGGTTTACT TCTCAAAGAT CTGCGAGTGA AATAATGTCG AAAATGGAAG AAACCGCAAA GCCATTAGGT TTCAATGTCC GTAAAGACAA CTACAAGATA AAAATGAAAG GAGACAAAAG TGGTCGTAAA GGTCAGCTCT CCGTAGCTAC AGAGGTGTTT GAAGTGGCGC CATCGTTGCA TGTGGTAGAG CTTAGGAAAA CCGGCGGTGA TACCCTCGAG TTTCACAAGG TATTTGATCC GTTCTACAAA ACCTTCTCAT CTGGATTAAA GGATGTAGTC TGGAATACTG ATGCAGCCGC TGAAGAACAA AAGCAATAAA AAATAGCAAG TTGTTCAATT CAAAGTTTTT AATTAAAGTT GAACATGTAT AATGAATAGT AAAAAATTCT GAGAGTTGGC AAAATAGAAT TATTCTAGAA GTGGCATATG CGATCATCCT CAAACTACAA GTCAAAGTTC AAACAATTCA ATTAG 
Length1525
Protein Sequence
Protein Residue
Map Locationscaffold_1: 430265.. 433551
Download Sequence
A.thaliana
AGI-codeAT1G01140.3
DescriptionCBL-interacting protein kinase 9
TAIR curator summaryEncodes a CBL-interacting protein kinase with similarity to SOS2
Alias[CIPK9][PKS6][SnRK3.12][CBL-interacting protein kinase 9][PROTEIN KINASE 6][SNF1-RELATED PROTEIN KINASE 3.12]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg494217 tonoplast dicarboxylate transporter
7.07107 Ahg470724 Calcineurin-like metallo-phosphoesterase superfamily protein
10 Ahg496705
11.6619 Ahg476523 B-box type zinc finger protein with CCT domain
12.49 Ahg488595 Homeodomain-like superfamily protein
14.3875 Ahg475736 senescence-associated family protein
14.4914 Ahg488432 CONSTANS-like 1
17.8885 Ahg931833 arginine decarboxylase 1
18.2483 Ahg490165 Octicosapeptide/Phox/Bem1p family protein
18.3303 Ahg493346 ERD (early-responsive to dehydration stress) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression