| Annotation |
|---|
| Description | jgi|Araly1|471385|fgenesh2_kg.1__1339__AT1G12370.2 |
| Sequence |
ATCGCGCGCT TTGTCGCTTG AGCATCCCCT GCGCAAGTTA TCCTCCTCCG CTGTCGTATA AACGGCGCAC ATTAGTGAAA ATCCGAAAAA TCCGTCTCTC CTCCTTCGTA ATGGCGACGG CAATCTCCGT TCAAACGGGT CGGATCCGGA TCCTAAAGAA AGGCTCATGG CAACCGTCGG ATCAAACGGT GGGTCCCGTC GTTTACTGGA TGTTCAGAGA TCAACGGTTG AAAGACAACT GGGCGTTAAT CCATGCCGTT GATCTTGCAA ACAGAACCAA CGCGCCGGTG GCCGTCGTGT TCAATCTGTT CGATCAGTTT CTGGACGCAA AAGCGAGGCA ATTAGGGTTT ATGTTAAAGG GTTTGCGCCA GCTTCACCAC CAAATCGATT CTCTTCAAAT TCCGTTTTTT CTCTTACAGG GAGATGCAAA GGAGACAATT CCTAATTTCC TCACAGAATG TGGAGCTTCA CATCTGGTTA CTGATTTCTC GCCTTTACGG GAAATTCGGA GTTGTAAAGA TGAGGTTGTG AAGAGGACGA GTGATTCATT AGCAATTCAT GAAGTTGATG CACACAATAT AGTTCCAATG TGGGCTGCTT CGGGTAAATT GGAGTACAGT GCTAGAACAA TTAGGGGTAA GATCAACAAG CTACTACCTG ATTACCTCAT TGAGTTTCCT AAACTTGAGC TGCCGAAGAA GAAGTGGACC GGGATGATGG ATAAGAAGCT GGTTGATTGG GATAGCCTCA TTGATAAAGT TGTAAGGGAG GGTGGAGAAG TTCCTGAGAT TGAATGGTGT GTGCCGGGAG AAGATGCGGG GATGGAAGTA TTAATGGGGA AGAAAGATGG GTTTTTGACA AAGAGGTTGA AGAATTATTC AGCGGACCGG AATAATCCTG TAAAGCCGAA AGCACTCTCT GGTCTCTCTC CTTATCTACA TTTCGGGCAG ATATCAGCTC AGCGATGTGC CTTGGAGGCG CGTAAAGTCC GGAATACTTC CCCTCAGGCG GTCGACACAT TCTTGGAAGA ATTGATTGTG CGAAGAGAAC TCTCCGACAA TTTTTGCTAC TATCAACCTC ATTATGATTC TTTGAAGGGA GCTTGGGAGT GGGCACGCAA GTCATTAATG GATCATGCTT CAGATAAGAG AGAACACATT TACTCGTTGG AGCAGTTAGA GAAGGGACAG ACAGCTGATC CTCTATGGAA TGCTTCACAG TTAGAGATGG TTTATCAAGG GAAAATGCAC GGTTTCATGA GAATGTATTG GGCAAAGAAG ATTCTAGAAT GGACCAAAGG ACCTGAAGAG GCCCTCTCAA TATCCATATA TCTAAATAAC AAGTATGAGA TTGATGGTCG TGACCCGAGT GGATATGTTG GGTGTATGTG GTCTATATGC GGTGTTCATG ATCAGGGATG GAAAGAGAGG CCGGTTTTTG GGAAGATACG GTACATGAAC TACGCGGGTT GCAAACGGAA ATTCAATGTG GACAGTTACA TCTCTTATGT CAAGAGTTTT GTGTCAGTAA CAAAGAAGAA GAGGAAAGCC GAAGAACAGC TTACCAGAGA CTCTATTGAT CCCAAGATAA ATAGTGTTTA GGTTAACTTC GAATGCCTTT GTGTTGTTAC TTGTTAGACT ACCTTGCCCT GCGTTGGCCA GTTTTATATT CAATGTATT |
| Length | 1679 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 4775029.. 4777508 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G12370.2 |
| Description | photolyase 1 |
| TAIR curator summary | encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele |
| Alias | [PHR1][UVR2][photolyase 1][UV RESISTANCE 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 18.2483 |
Ahg335256 | ATP binding microtubule motor family protein |
| 21.4942 |
Ahg487267 | Nuclear transport factor 2 (NTF2) family protein |
| 23.4947 |
Ahg350602 | high affinity nitrate transporter 2.7 |
| 26.8328 |
Ahg330043 | Chlorophyll A-B binding family protein |
| 28.2489 |
Ahg331043 | zinc knuckle (CCHC-type) family protein |
| 33.9411 |
Ahg349529 | non-intrinsic ABC protein 9 |
| 33.9853 |
Ahg494585 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 35.1568 |
Ahg934499 | SOUL heme-binding family protein |
| 44.7661 |
Ahg470177 | Homeodomain-like superfamily protein |
| 47.3392 |
Ahg931833 | arginine decarboxylase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|