| Annotation |
|---|
| Description | jgi|Araly1|470177|fgenesh2_kg.1__131__AT1G01060.3 |
| Sequence |
ATTTTTTTTT TTGCTTCCGA TTTGATTATT TCCGGGAACA ATGACTTCTC CGGCTAGTTC CCAGTGAGAT GATCTAGTTT GCATATTTGG TTCCTCCATG GCTACTCTCA AGGGTTTTGG CTGCGATGGA TTCGTTTGGT TTCTCTAGAA TCTAAAGAGG TTATCACAAC GGCTTTGCAA TTTGGAAACT TTCATGTTTG GGGAGATCAA AGATGGTTTC TTTATTATAT TTTACTTGTT AGAGAGGATT TGAAGCAGCG AATAGCTGCA ACGGTCCTGT TATGGATACT AATACATCTG GAGAAGAATT ATTAGCTAAG GCAAGAAAGC CGTATACAAT AACAAAGCAG CGAGAGCGAT GGACAGATGA TGAGCATGAG AGGTTTCTAG AAGCCTTGAG GCTTTATGGA AGAGCTTGGC AACGAATTGA AGAACATATT GGGACAAAGA CTGCTGTTCA GATCAGAAGT CATGCACAAA AGTTCTTCAC AAAGTTGGAG AAAGAGGCTG AAGCTAAAGG CATCCCTGTT TGCCAAGCTT TGGACATGGA AATCCCACCT CCTCGTCCTA AACGGAAACC CAATACTCCT TATCCTCGAA AACATGGGAA TAACGGTACA TCTTCGTCAC AAATATCATC AGCAAAAGAT GCAAAACTTG TTTCGTCGGC CTCTTCTTCA CAGTTTAATC AGTCGTTCTT GGATTTGGAA AAAATGCCGT TTTCTGAGAA TACATCAACT GGAAAAGAAA ATCAAGATGA TAATTGCTCG GGTGTTTCTA CTGTGAACAA GTATCCCTTA CCAAAGAAAA AGGTAAGTGC CGATATTGAA ACAAGTAAGA CCTCAACCGT GGACAACGCG GTTCAAGATG CTCCCAAGAA GAACAAACAC AAAGATGGTA ACGATGGTAC TGTTCACAGC GTGCAAAACT ACCCTTGGCA TTTCCACGCG GGTATTGTGA ACGGGAATAT AGCAAAATGC CCTCAAAATC ATCCCTTAGG TATGGTATCT CAAGACTTCA TGTTTCATCC TATGAGAGAA GAAAGTCACG GGCACGCAAA TCTTCAAGCT ACAACAGCAT CTGCTACAGC TTCTCATCAA GCGTTTCCAG CTTGTCATTC ACAGGATGAT TACCATTCGT TTCTACAGAT GTCTTCTACT TTCTCCAATC TTATTATGTC AACTCTCCTA CAGAATCCTG CTGCTCATGC TGCAGCTACA TTTACTGCTT CGGTCTGGCC TTATGCGAAT GTTGGGAATT CTGGAGATTC GTCAACCCCA GTGAGCTCTT CTCCTCCAAG TATAGCTGCC ATTGCAGCTG CTACAGTAGC TGCTGCAACT GCTTGGTGGG CTTCTCATGG ACTTCTTCCT GTATGTGCTC CAGCTCCAAT TACATGTGTT CCATTACCAA CTCCAGCAAT GACTGAGATG GATACCGTTG AAAATGCTCA ACTACCGCTT GAGAAACAAA ACACAGCTCT GCAAGATCAA AACGTGGCTT CAAAATCTCC AGCTTCATCA TCCGATGATT CAGAGGAGAC TGGAGTAACC AAGATAAATG TCGACTCAAA AACCCAAGGT GATAAGGTTG GGGAGGTTGT TGTTGCTGCT GCTGTGCATG ATTCAAACAC TACCCAGAAG AAAAATATGG TGGATCGGTC ATCGTGTGGC TCAAACACAC CTTCAGGGAG TGACGCGGAA ACAGATGCAT TAGATAAATT GGAGAAAGAT AAAGAGGATG TGAAGGAGAC AGATGAAAAT CAGCCAGATG TTATTGAGTT AAATAACCGT AAGATTAAAA TGAGAGACAA CAACAACAAC AACAACAACC CAACTACTGA TTCATGGAAG GAAGTCTCCG AAGAGGGTCG TATAGCGTTT CAGGCTCTCT TTGCAAGAGA AAAATTGCCT CAAAGCTTTT CACCTCGTCA AGTGGCAGAG AATGTGAATA GAAAACAAAG TGACACAGCC ATGCCATTGG CTCCTAATTT CAAAAGCCAG GATTCTTGTG CTGCAGACCA AGAAAGAGTA GCAATGATCG GTGTTGGACC AGGCAAGAGT CTTAAAACGA GACAGACAGG GTTTAAGCCA TACAAGAGAT GTTCAATGGA ACTGAAAGAG AGCCAAGTTG GGAACACAAA CAATCAAAGT GATGAAAAAG TCTGCAAAAG GCTTCGATTG GAAGGAGAAG CTTCTACATG ACAGACAGAC TGCGCTCATT GCCCAAAAGC CAAAGGCCTA AAGGTGATAG GCTGGGCTTT AAAGATTTAT TCACTACTCG GCCTACATTA CAGCATTTTC CCCATTATAC AAGCTTAACT AATAGAGGCC TAAAGCAATC TCTTAATTTG TTTTACTGAT GAATGA |
| Length | 2366 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 467152.. 471297 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G01060.1 |
| Description | Homeodomain-like superfamily protein |
| TAIR curator summary | LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 |
| Alias | [LHY][LHY1][LATE ELONGATED HYPOCOTYL][LATE ELONGATED HYPOCOTYL 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg488445 | conserved peptide upstream open reading frame 10 |
| 2.44949 |
Ahg931833 | arginine decarboxylase 1 |
| 2.64575 |
Ahg935667 | circadian clock associated 1 |
| 2.82843 |
Ahg477481 | conserved peptide upstream open reading frame 9 |
| 3.16228 |
Ahg494217 | tonoplast dicarboxylate transporter |
| 3.4641 |
Ahg934945 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| 4.58258 |
Ahg485852 | |
| 4.89898 |
Ahg482070 | salt tolerance homologue |
| 6.63325 |
Ahg487463 | ABC-2 type transporter family protein |
| 6.7082 |
Ahg492115 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|