Detail



ID : Ahg472139

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472139|fgenesh2_kg.1__2093__AT1G19150.1
Sequence
ACAATCAAAG ATGACACTAG CTAGACATTT TCATTTTCAT CTCCCACGAA TCAAAGATGG CTTTTGCCAT TGCTTCTGCT CTCACTTCCA CACTCACATT ATCTACGAGC AGAGTCCAAA ACGCGACCCA GAGAAGACCA CAAGTAGCGT CCGCATCACC CACTGGTGGA AGAATGAGTG AGCGCTTGGT GGTGGTTCGT GCCGGCAAAG AAGTTTCTAG CATCTGTGAA CCACTTCCTC CGGACCGTCC TTTGTGGTTC CCTGGTAGCT CTCCACCTGA ATGGCTCGAT GGCAGCTTAC CTGGTGATTT TGGTTTCGAT CCTCTCGGTT TAGGGTCTGA CCCGGACACC CTCAAATGGT TTGCACAAGC TGAGCTCATA CATAGCCGGT GGGCAATGCT GGCCGTGACA GGTATCCTAA TACCGGAATG TCTAGAGCGG TTAGGTTTCA TCGAGAATTT CTCATGGTAC GACGCAGGGT CTCGTGAGTA CTTCGCGGAT TCCACTACGT TGTTTGTGGC TCAAATGGTT TTAATGGGCT GGGCAGAGGG TAGAAGATGG GCTGATTTGA TTAAACCGGG GTCTGTGGAC ATAGAACCAA AGTACCCGCA CAAAGTAAAT CCTAAACCGG ATGTTGGTTA CCCGGGCGGT TTATGGTTCG ATTTTATGAT GTGGGGTAGA GGTTCTCCTG AACCGGTAAT GGTTTTGAGG ACTAAAGAGA TTAAAAACGG ACGGCTCGCG ATGCTTGCTT TCGTTGGGTT TTGTTTCCAA GCTAACTACA CTAGTCAAGA TCCAATTGAA AATCTCATGG CTCATCTTGC TGATCCTGGT CATTGCAACG TCTTCTCGGC ATTTACATCA CATTAATGAG GATTAGCCTG CGGCAAAATT AATTTTTTTA TAAATATAAT AGATCATGGA TGTTGAACTT TTGTATATAG CGTCACTCGC CGTTGTTACA ATTCATGCTT ACTTAATTAA TTACGTAACA TGTAAAATAA GTATATGAAC AAGAAACAAG ACGAGAAAAT GAGCTTTATT AT 
Length1042
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7703534.. 7704829
Download Sequence
A.thaliana
AGI-codeAT1G19150.1
Descriptionphotosystem I light harvesting complex gene 6
TAIR curator summaryPSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,
Alias[LHCA2*1][Lhca6][photosystem I light harvesting complex gene 6]
Gene coexpression
MR
MR Locus Description
12.1655 Ahg919443 alternative NAD(P)H dehydrogenase 1
12.9615 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
15.4272 Ahg477371 carbonic anhydrase 1
18.4932 Ahg356132 alpha/beta-Hydrolases superfamily protein
19.1833 Ahg317476 RING/U-box superfamily protein
19.4422 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
24 Ahg476549 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
24.7386 Ahg485048 plastid transcriptionally active 16
26.8328 Ahg489817 ATP synthase delta-subunit gene
27.7128 Ahg473938 mitochondrial lipoamide dehydrogenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression