Detail



ID : Ahg477472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477472|fgenesh2_kg.3__173__AT3G02380.1
Sequence
AATTACAATC TCTCCTTTTG CCAATAATCA TTGCTTAGAA AAAACATAAT GATGTTGAAA GAAGAGAGTA ACGAGAGTGG TTCTTGGGCA CGAGCATGTG ACACTTGTCG TTCAGCCGCC TGCACTGTCT ACTGTGAAGC TGACTCTGCC TACTTGTGCA CCACCTGTGA TGCTCGAGTT CACGCAGCCA ATCGTGTTGC TTCTCGCCAT GAACGTGTTC GTGTCTGTCA GTCATGTGAA TCTGCCCCGG CTGCGTTTTT GTGTAAAGCA GACGCTGCGT CTCTTTGCAC AGCTTGTGAT GCTGAGATTC ATTCCGCAAA CCCACTAGCT AGACGTCATC AACGAGTTCC GATTCTGCCA TTATCTGCAA ACTCTTGCAG CTCCATGGCC CCAAGTGAGA CTGATGCAGA TAACGATGAG GATGATCGAG AGGTGGCTTC GTGGTTACTG CCTAATCCAG GGAAAAACAG CGGTAATCAG AACAATGGGT TCTTGTTTGG TGTTGAGTAC CTTGATCTCG TGGATTACAG CTCCAGCATG GACAACCAAT TCGAAGATCA TCAGTACAGT CACTACCAAA GGAGCTTTGG AGGAGATGGA GTTGTGCCAC TTCAAGTTGA AGAATCAACA AGTCACCTTC AACAAAGCCA ACACAACTTT CAGTTGGGTA TCAACTATGG CTTCTCCTCA GGACCTCACT ACAACAACAA CTCCTTAAAG GACCTAAACC ATAGCGCATC CGTTTCATCA ATGGACATCA GTGTTGTGCC AGAGTCAACA GCAAGTGACA TAACAGTCCA ACACCCAAGA ACAACTAAAG AGACGACAGA CCAACTAGCT GGTCCTCCTA CTCAGGTGGT GCAGCAGCTT ACTCCAATGG AGAGGGAGGC TAGGGTCCTG AGATACAGAG AGAAGAAGAA GACGAGGAAA TTTGACAAGA CAATAAGGTA TGCTTCAAGA AAGGCATATG CAGAGATAAG ACCACGGATC AAGGGCCGAT TCGCAAAGAG GATAGAAATT GAAGCTGAGG CTGAAGAAAT TTTCTCAACA TCGCTAATGT CTGAGACCGG ATATGGAATT GTTCCTTCCT TCTGAACTCG TGTGGCGAAG ATGGACTAGA TTGCATGCTG TAAATTACTT CTAGTTTGTA TTTCTACAAG TTTTTACCAC AGTT 
Length1174
Protein Sequence
Protein Residue
Map Locationscaffold_3: 543634.. 544963
Download Sequence
A.thaliana
AGI-codeAT3G02380.1
DescriptionCONSTANS-like 2
TAIR curator summaryhomologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins
Alias[ATCOL2][BBX3][COL2][CONSTANS-LIKE 2][B-box domain protein 3][CONSTANS-like 2]
Gene coexpression
MR
MR Locus Description
1 Ahg488595 Homeodomain-like superfamily protein
2 Ahg474897 Glutaredoxin family protein
2 Ahg476523 B-box type zinc finger protein with CCT domain
4.24264 Ahg935667 circadian clock associated 1
4.24264 Ahg313311 Dof-type zinc finger DNA-binding family protein
4.79583 Ahg324943 LHY/CCA1-like 1
4.89898 Ahg488432 CONSTANS-like 1
4.89898 Ahg342260 B-box 32
5.47723 Ahg494217 tonoplast dicarboxylate transporter
5.91608 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression