Detail



ID : Ahg927000

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927000|scaffold_202561.1
Sequence
TGATCCCAAA AAATAAAGAA AATGGTCGCA ATTACATCAG CTACCGTCAC CATCCCTTCT TTAACCGGCC TCAAGCTCGC CGTCAGCTCA AAACCTACGA CATTATCCAC CACCATTAGA TCCTCCTCCG CTACCAGGAC GGCACCTAAG CTCTCTGTGA AGTCCTCTTT GAAGGATTTC GGCGTCATCG CCGTTGCAAC AGCAGCTTCG ATTGTTTTAG CCGGAAATGC AATGGCCATG GAGGTTCTTC TAGGATCCGA CGATGGTTCT CTTGTTTTCG TACCATCTGA ATTCACAGTG GCTAAAGGAG AGAAGATCGT GTTCAAGAAC AACGCAGGGT TCCCACACAA TGTTGTGTTC GACGAAGACG AGATCCCTAG TGGTGTGGAC GCGACCAAGA TCTCGATGGA CGAGACAGAG CTTCTTAATG GTGCGGGAGA GAGTTACGAG GTTACTTTGA CAGAGCCTGG CTCTTACAGT TTCTATTGTG CGCCGCACCA GGGTGCTGGT ATGGTCGGGA AACTCACCGT CAAGTAGTAA ATTGTCTCGA GAATCTC 
Length557
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16023333.. 16023878
Download Sequence
A.thaliana
AGI-codeAT1G76100.1
Descriptionplastocyanin 1
TAIR curator summaryOne of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions.
Alias[PETE1][plastocyanin 1]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg485048 plastid transcriptionally active 16
9.94987 Ahg470899 photosystem I subunit O
10.3923 Ahg472262 Cupredoxin superfamily protein
12 Ahg486624 photosystem I light harvesting complex gene 2
13.9642 Ahg922093 photosystem I subunit K
18.6548 Ahg492755 photosystem II subunit QA
20.9762 Ahg490167 photosystem II subunit Q-2
21 Ahg486922 light harvesting complex photosystem II
21.2132 Ahg473640 photosystem I subunit F
21.4942 Ahg495628 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression