Detail



ID : Ahg471781

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471781|fgenesh2_kg.1__1735__AT1G15820.1
Sequence
AGAAATCTAT CCACGACAGC CTCTGAGATT TCGTCTATAG ATTTTCATTA TCTCACATTG TCCCTCTAAA TCTCCTCCCT TTGATTCTTT CTGCTCCGAA AACAGAGAGA ACAACCAAAC ACTCACTTCT CCACATCTTG AGAGAAAAAA AACAGAGGAG GTATATTAGA GATCTCATGG CGATGGCGGT CTCCGGAGCT GTCCTCAGTG GGCTTGGTTC TTCGTTCCTC ACCGGAGGCA AGAGGAGTGC CACCGCATTG GGAAACGGCG TTGGCACTGG AGCTCAGAGA GTTGGCCGGA AAACTCTGAT TGTCGCTGCT GCGGCTGCTC AGCCTAAGAA ATCTTGGATC CCTGCCGTTA AAGGTGGTGG CAACTTCCTT GACCCTGAAT GGCTCGATGG CTCGCTACCG GGTGATTACG GGTTCGACCC ACTGGGTTTG GGAAAAGACC CGGCTTTTCT GAAATGGTAC AGAGAGGCTG AGCTGATCCA TGGCCGATGG GCGATGGCAG CGGTTCTTGG GATCTTTGTT GGCCAGGCTT GGAGCGGTGT GCCTTGGTTC GAAGCTGGAG CCCAGCCAGA CGCGATCGCT CCCTTCTCGT TTGGGTCGCT TCTTGGAACC CAATTGCTTC TCATGGGTTG GGTGGAGAGC AAACGATGGG TCGATTTCTT CAACCCGGAT TCTCAATCGG TTGAGTGGGC GACGCCGTGG TCGAGGACCG CCGAGAATTT CGCCAACTAT ACCGGCGATC AGGGATATCC CGGTGGGAGA TTCTTTGATC CGTTGGGTCT CGCCGGCAAA AATCGCGACG GTGTTTATGA GCCGGACGTA GAGAAGCTGG AGAGGCTGAA ATTGGCGGAG ATTAAGCACT CGAGGCTCGC AATGGTTGCC ATGTTGATCT TTTACTTTGA GGCCGGGCAG GGGAAAACGC CTCTCGGTGC TCTTGGTTTG TGAGATAACG GCATGATGTT TTTGATTCTG TAGATACAAT TTCTCTTTCA AAAACCTAAT GTTTCTCCTC TTCAATGTGA CATTTGGGAA AAGATCATCA TATCATTGCT TAAAAATGTA AAATGAATTC ATATGAGGCT TGTTCATAAA TAACTTTATT ATCGCAACTC AAACATGAAA GGGAATACTA AACATCAATG AAAGAGATCC ACAACTTCAT T 
Length1171
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6387540.. 6388965
Download Sequence
A.thaliana
AGI-codeAT1G15820.1
Descriptionlight harvesting complex photosystem II subunit 6
TAIR curator summaryLhcb6 protein (Lhcb6), light harvesting complex of photosystem II.
Alias[CP24][LHCB6][light harvesting complex photosystem II subunit 6]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg485905 photosystem I light harvesting complex gene 1
2.44949 Ahg922093 photosystem I subunit K
3.74166 Ahg486922 light harvesting complex photosystem II
3.87298 Ahg470899 photosystem I subunit O
5.2915 Ahg489877 light harvesting complex of photosystem II 5
5.47723 Ahg496598 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
5.56776 Ahg483311 Rhodanese/Cell cycle control phosphatase superfamily protein
7.2111 Ahg918978 photosystem I subunit D-2
7.48331 Ahg495512 light-harvesting chlorophyll B-binding protein 3
7.48331 Ahg486624 photosystem I light harvesting complex gene 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression