Detail



ID : Ahg488065

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488065|fgenesh2_kg.6__1199__AT5G12220.1
Sequence
AAAACCCTAA AAGCTTACGA GACTCATCAA TGGAGGCGCT AGCGGGAATT GAAGCAGACA TCGAATCGTA TTTCGGAGAG CAGGATCAAC AGAAATCGTC ATCGGACGGC TGCAAACAGG TCCCTTGGCT GAGTTGGGAA GAGTGGGACT CAGTGAGAGA GTCTCTCTTC TCTTCATCTC TTGATAGAAT CGCTTCTGCA TTGGAAAGGG TTGCAACATG GCGAAGTCGA GGATCTCTTC CAGCACCTGT GGATGTTACT TGTTCCCTTA TTGAAATTCA GCTCAAAGAT GGCTTTATTC CGAGAGAGGA ACAATCAGCA GATGCATTAT ATTCAGAGCA TTTACTGCAG ATGCTTTATT GCATGGGTAT ACTCAGGCTT GTGAACTGTG TCATAGAAAA GACAAGGAGG AGAGAAGATG TTTCAATTGC GGATGCAGCT AGAGCAATCG GTATCCCACG TAAATTAATC GATCTTCGTC ATGAGGGTTC TCACCGTGAG CTCCCTGCAC TCTCGGTGCT TCGGGATGCT GCAGATGAGG CACTTGAATG GTTGAAATCT TATTATTGGG AGCCACAGAA GTATCAAATT CCCTTAAAGA GAGATGGAAC GGCTAGCATC AGAAGAGAAG TCAAATCCAA ACTCAGGAAA CTTGCTTTCT CCTTGCAGCT TAAGCATAAT CCTCAATTTG ACTCCCCTTT GGTCAAAGAA AACTGTTCTA ATAAAAGGAT AAGGAAGATC GTAAGTAGCC TTGTTGAGTT ATACCCTTCT TTCTCCGCAG AAATTTCATC TGTGCTCCTT GAATTCTTAC TCAAGGCCTT GGATTCTTCA AAGTCGACAG ATCTTCAGAA TAAGCCTGGG AAAGATTTCA GAGGCTTCCT AGCAGAATGG AAACCTGTAA TCATGGAGCT CTCAAATAGA GAACCCGAGT TGCTTTTGAC TCTACTCAAG GAAGTTCTTG ATATGATCCA ATATAATGAA CGGAGAAGAT ATGAAACCGA AAAGCAAGCG GAAGAGGTTT CTCAAGTTGA GCAGGTCCCT TTCTTGTTTG CATGGCTTGT GAGTCTTCTC AATGGGTCAA AGCATTTTCA AAGAAACAGT TCTGTAGAAG TGAAACCTCC AAGCATTTTC CTTATGGAAC TTATACGTAG ATGTCTTCTC TTGGGAGCCT TAGGAAACGA GCCGGTTCTG AAATCAGCAT TCCTACTCGC AGAGATTGTG GGAGGCCGTG TTTTAAAGGA GAAGCTCATA AAACTCCCTC TCATGCATAA AGGCTCTGCA ATTGTTCCAT TGGAACAGAG TTCTACTCTT GTAACAGCTC CTACAACGCT CCTTGAACAA GAGAAGAATC TCGGTAATGC AGGCAAGAGA CTTGAGTTCG TCAAACTTCA ACTCTCAAAG AAAAAAGGTA TCGACACAGA CAAAACCGGT AACAGATGGA GAAAGGCAAA AACATGGAGC CCTTGCCCAA TTGGCATGTT GCCTCGGATC ATTGGATCTT CTGGACGTTT ACCTCTTCTT GACTATCACA ATGCTCAGAG CATCTCAAAA CAAGCACAAG GTAACAACAA TGCCAAGAGA GGAACTGAGT GTAATAGAAA GCAATTGGAG AAATCACCAT GCAAGCGAGC AAGGAAGAGT GCAGAAGATT CTGACACAAA TGATGTGACA TTGGAAGCAT ACGAGGAAGA AGCTGAGATG GAAATAGAAC ATGCATATGA GGAAACTGAA GCTGTAGCAG AAGAGAATCT GATGTGGAAT GATAAAGAGG AAAGCAGAAG CTGTCTTATG ATAGATGGTG AATGGAAAAG AGTCAATGAA GGAGAACTAT CGGGGATGGC TTCGAAAATT ACAATTTGTG TCTGAGATTT CTGCAGATGT AACCATATAA ATATTTGATC AACTTTT 
Length1907
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4773047.. 4776007
Download Sequence
A.thaliana
AGI-codeAT5G12220.1
Descriptionlas1-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.07107 Ahg342721
8.60233 Ahg940041 DnaJ domain ;Myb-like DNA-binding domain
12.1244 Ahg486610 Protein of unknown function (DUF3245)
14.2829 Ahg903463 Homeotic gene regulator
21.8174 Ahg476259 Vps52 / Sac2 family
29.2575 Ahg471412
33.7639 Ahg477337 ARM repeat superfamily protein
34.7275 Ahg339148
40.6202 Ahg916775 Zincin-like metalloproteases family protein
43.1625 Ahg317213 dicer-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression