Detail



ID : Ahg497006

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497006|fgenesh2_kg.8__2822__AT5G66100.1
Sequence
CTCTCTCTTC CTCTGTTACA GGATGGCTAC GACGGCGAGT AGTGCCGCTA ATTCTGCATC TCGCTTCTCC ATTGATTCCT CTTTGTCGCG ATCAAGTCAC AGCGATTCCT CTCCCTGGTT GATGCCTGCT GCTGATTCCC ATGATGATCC GGCTCCTTCC CTCTCCCAGG ACGATCCCTT CTTAACCGGA AATGGCACTT CCGACTACGA CAATGCTGAT CAGAAGCCTC CTGTCTGGAA CATGCCTTCT TCTAATAGCT CCCCCGATGT CATGGGCGCC GCCGAATCCT GGCCTGCTCT TCGGTCTTCT TCCAACAAGT CTCCCTCTTT CGATTCTTCC AAACCTTTAT CTGATGGATC ATCATCATCA TCATCATCAT CATCACCAAT GCCGCCTCCC CAGGCTGGTG GAACTCCTTT CAATGCCAAT GCTGGCTCAA GTGTTGCTGC TACCTCATCT GAAAACAATA CTGTGAATAA TAGCCCGAGG AAACCTTTTA GACGGAATAA CAACGCATCA TCTTCCAGTA GTCACATCTC CAACCCACCC AGTGCTGCGC CTTTTAACAC CAGAGATCAG ACTCACACTC AAAGGGGTGG TTCTTATGGC TCAGGGAATT TCCGTAATTC CCAGAGGAAT CGCAACAACA GCTCTTACCC TCGTGGGGAA GGTCTTCACC ATGGAAACAG GCGCAATTAT GAGAGCGGGT TTTCTCACCG TAACTATAGT GGGAGAGACA TGCACTTGCA ACCGCAGAGG GGTATTGGGA TGATGAGACC GCAGATGCTG ATGGGGCCAC CATCTTTTCC TGCCAGTAGT GCGCAATATA TGGCAGCGCC TCAATTAGGT TCATATGGTG GCCCCATGAT CTACCCAGAT TATGCACAGC ATGTCTTTAT GCCACCTCCA GACCCCATGG CTTTAGTTGG ACCCTTCCCA CCTCTGCCCG TGTATTTTCC CAGTTATGAT GCCATGTTGT ACAATAAGAT ATTGACACAA GTAGAATATT ATTTCAGCGC TGATAACCTG AGCAGAGATG AACACTTGCG GGATCAGATG AATGATGAAG GTTGGGTTCC TGTAAGAGTA ATAGCAGGGT TCAGGAGACT TGCAGAACTG ACCAACAACA TCCACACTAT ATTGGAAGCA CTAAAAAGTT CAGAAGTCGT GGAAATTAAG GGTGAAACAT TGAGGAGGCG AGGAGATTGG GACAAGTATT TATTGCCTCG TGAGCCTTCA AAGTTCGGTC CAGCAGCGGG GGCTAGCAAC AATGCCTCAC TGGTGTCTCA ACTTGAGAGC ATGGCTCTAT CAGAGAGGAG CAGAGAGGGA GAGTAAAGAG ATGCGACTAA GAGAGAGGAA GAAAGATGTG TTTGCATGCC TCTCTCTCTC TTTCTTTCCT TTTTTTTGTT TTGTCGAGAA TCGGATAGGA ACTGATTGAT AGTCGGTCTC ATCATAAGAA AAACAAATAA TATGCTGCTC AACTTTTTTT GAACTTTTCT GGTTTTCTTT AAATTTTTGG ATAGGAAAC 
Length1529
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21494415.. 21496753
Download Sequence
A.thaliana
AGI-codeAT5G66100.1
Descriptionwinged-helix DNA-binding transcription factor family protein
TAIR curator summary
Alias[AtLARP1b][LARP1b][La related protein 1b]
Gene coexpression
MR
MR Locus Description
14.4914 Ahg949155 Aldolase-type TIM barrel family protein
27.1293 Ahg919635 Histone superfamily protein
28.4605 Ahg923761 NUP50 (Nucleoporin 50 kDa) protein
30.1993 Ahg481988
43.1625 Ahg486329 citrate synthase 2
47.9583 Ahg939499 prenylated RAB acceptor 1.B5
48.2804 Ahg488271 Pentatricopeptide repeat (PPR-like) superfamily protein
50.5569 Ahg473141 SecY protein transport family protein
54.6626 Ahg491884 Glutaredoxin family protein
58.3781 Ahg475472 alpha-1 tubulin
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression