Detail



ID : Ahg888149

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888149|Al_scaffold_0007_135
Sequence
ATGGAAAAGT TGGTGAATGA AGGCCCAACT CTGCTGCAAT TGCACAAGTG GGAACCTTCT CAATTGCAAC TGAAGCTCTC AGAATTTCGT GAGGCGTTTA TTTCTCCGTC GAGGCAGTTG CTATTACTAC TCTCGTACCA CTCCCAAGCT TTGCTGCTTC CTTTGGTTGC AGGGAGGTCC ATTGGCAGTG AGGTTTCGGT AAGCTGTCAT AGTGAAGAGC CGAATAGTCC TACATTCTCT GGTGGGTCAG ATCCACCTTC TGGATCAGGT GTTGGTTCTG GTGAGCCAGG TTTTGTAGAT AATTTCAGTT CTAGTTGCAA TAGTTTCCCT TTTATCTTTG ATGTAAAGTC TGTTGCTTGG GGTAGTTGTG GAGATACTTA CAATCGGCAC AAAGATCCTT TGTTTAGGGA ATTGTTGTTT GTATCTGGAA ATCATGGTGT TACGGTCCAT GCTTTTTGCT GTACAAAAGA TTCAAGTGAC AGAGCCAAAG ACAAACCTAA TGGTGAGCTG AGGCATGGGG AGTGGGTTGA ATGGGGACCT TCTAGGCTTA ATCAGAAATC AGAACATGAA AGAGTCTCTT CTTTTGATGG CGCAAAGCAG TGGATGCAAT CTTTTTTGAT TGATTTGGAA ACTACTGAAA TTGAGGGTAT AAGACAGTCA AGGTTCCCTG AGAAGTCAGC GTTTCCTGCT TCTGCAGAGG TTGTTTCATT CAGCATATTA AATACTGATT TACCTTTCTC GAATCTTCTT TTCCAAGACA ACTCCATACT TCAGAAGGAT AATATGCCTG AGGATGGTAA TGTAAATGAC AATAATTTTC TCGTAGCATC AGATCCAGCT GCTTTGGATG AAAAATCTCG AGCTGATATG CCCATAAACA ATGCCAGTGT AAGCAGCTTG TACAGGTGCA TCAAAGTTTT CTCCAGCGAT TCTCATTCTC TGATTGGATT TGTTATGGAG TTATCGGATT GTGCATCTAC CCCTACAAGC AATGAAAACG AAAGAAGCAA GGGTAAGAGA ATTGTCTTTG TTGCCAAGCT GTTTAGCTGG GGGATAGAAT GGGCCTCCCT TGTGAAGTTC GGGGAATCAA GTATTGGACC TACAAATGAG TGGGCAGATT TCCGGCTATC TGATAAATTT GTTATCTGCC TCAGTGTTTC TGGTTTGATC TTTCTATATG ATGTGAATTC TGGGGATTTT ATTTCTCATG GGGATATCTT ACAGACATGC AGTCGTGGAT TGCATTCTTC ATCAGATATG CAAGAAGCAA CTGCAGAAGT AGATCAGCGA AGTAACTTTC AAAATCGTGT TCCATCCATG TCTAAGACTT GCATTGTTGG TTCCGCAGAC AGAAGAAAGT TTAGAAAGCT TATCGTAGCT TCTCATACAC CACTCATAGC TGCAGTTGAC GAAAATGGTT TGGTATATGT ATCATGTGTT GATGACTTTG TTTCCAAGGA ATACCACATG TCCGTGGAAC CTATTCCTGA TTTACGTCAT CTTGGGCTTG GAAGTCTGGT TGGGTGGAAA ATCGGCGGCA TGGACGTTGG CCAGAAAAAA GTGCACCATC CTAGCTCCTC TGGCTCTCGA GGTGAAGATG CTTTTTCCAG GTGTGATCCT AGCTTTTCTG CTTCGGAAAT CTCGATATCT GACCCATGTT TGGAAAGAAA ACATAACAAT TTTGATCGAA GAGCTGGTTA CTCTGGTTCA TGGTTGAGTG GTTTTTCTGT TCAGCCTAAA ACGAATTTGC TGAGACTTGA AAATTTCCGA AGAGACTCGC ATGTCATGCG GAAGATGTTT CTATCCACTG AAAAATTAGG ATTGGATGAT AACATATGTT TTTCTCCATT GGGATTTACT CATTTCTCTA GAAAGTATAC AAATAAGGAC GATCGAAGCT GTAAGATTTT TCATTATAGT CTGCAGACGC ATATGACTAC GAGAGATGAT AGTTATTTGA ATTACAATGT CAACAATGAT TCTATTCAAG GTGCAGAAGA GAGTTTCATA GGAGAATCAG TTGGTTGCTC TTTCCAAGGA TTTCTTTATT TGGTGACTTG TAGTGGTCTT TCAGTTTTTC TCCCTTCTAT CTCAATAACC TCAAATTACC CAACTGTTGA GGCCATTGAA TATCTGCAGC CACTCCAGAC CACTGTCATG GGATACCAGG AAAGAGACGA TTTGAGAGCA GGGGAATCAC GTTTTCCTTG GCAAGTTGAG GTCATAGATA GAGTTATCTT GTTTGAAGGC CCTGAAGTAG CAGATCATGT ATGCTTGGAA AATGGTACGA AACATTACTC ACGTTGTTCA TAA 
Length2313
Protein Sequence
Protein Residue
Map Locationscaffold_7: 517436.. 519553
Download Sequence
A.thaliana
AGI-codeAT4G39420.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.0995 Ahg488458 carboxyesterase 17
11.1803 Ahg945110 MATE efflux family protein
16.1245 Ahg495722 expansin A14
19.8997 Ahg925208 binding
27.4226 Ahg943674 transducin family protein / WD-40 repeat family protein
33.6898 Ahg927355 organic cation/carnitine transporter 2
38.1838 Ahg933988
38.3406 Ahg483392 Pentatricopeptide repeat (PPR-like) superfamily protein
44.4972 Ahg943920
46.2817 Ahg891858 Disease resistance protein (TIR-NBS-LRR class)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression