Detail



ID : Ahg909457

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909457|Al_scaffold_0002_2538
Sequence
ATGGAGAGGT ATGAGATAGT GAAGGATATT GGGTCTGGTA ATTTCGGAGT AGCAAAGCTT GTTCGTGAGA AATTTTCCAA AGAGCTTTTC GCTATTAAGT TCATCGAGAG AGGCCAAAAG ATTGATGAAC ATGTACAAAG AGAAATCATG AATCACAGGT CACTCATCCA TCCCAATATA ATAAGATTCA AGGAGGTTTT GTTGACGGCA ACACATTTGG CGCTAGTAAT GGAATACGCC GCCGGAGGAG AACTGTTCGG AAGAATCTGC AGCGCCGGGA GATTCAGTGA AGACGAGGCA AGGTTTTTCT TTCAGCAGCT TATATCAGGA GTTAATTACT GTCACAGTCT TCAAATATGC CATAGAGATT TAAAGCTAGA GAACACTTTA TTGGATGGAA GTGAAGCGCC ACGCGTAAAG ATTTGCGACT TCGGATATTC AAAATCAGGA GTTCTCCATT CGCAACCAAA GACCACTGTA GGAACACCTG CTTACATTGC GCCTGAAGTG CTCTCCAAGA AAGAGTATGA CGGCAAAATC GCTGATGTTT GGTCTTGTGG AGTCACTTTG TATGTCATGC TTGTTGGTGC TTATCCTTTT GAAGATCCTT CTGATCCTAA AGATTTTCGG AAAACCATCG GTCGGATTCT CAAAGTTCAG TATTCCATTC CTGATTATGT TCGAGTTTCG GATGAATGCA GACATCTTCT CTCTCGGATA TTCATTGCCA ACACTGAAAA GAGAATAAGG ATAGAGGAGA TAAAGAATCA TTCTTGGTTT CTCAAGAATT TGCCGGTAGA GATGTCTCAA GGATCATTGA TGATGAATGG TCCATCGACT CAAACAGTGG AAGAGATAGT GTGGATCATT GAGGAAGCTC GGAAACCGAT CACAGTAGCT ACTGGACTCT CCGGTGCTGG TGTCTCTGGT GGAAGCAGTA ATGGTGCCAT TGGAAGTACC AGTATGGATC TCGATGACTT GGACACCGAT TTTGACGACA TCGATACCGC TGATCTCCTT TCCCCTATGT GA 
Length1032
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17108568.. 17110040
Download Sequence
A.thaliana
AGI-codeAT1G78290.2
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[SNRK2-8][SNRK2.8][SRK2C][SNF1-RELATED PROTEIN KINASE 2-8][SNF1-RELATED PROTEIN KINASE 2.8][SNF1-RELATED PROTEIN KINASE 2C]
Gene coexpression
MR
MR Locus Description
9.79796 Ahg488595 Homeodomain-like superfamily protein
11.225 Ahg493346 ERD (early-responsive to dehydration stress) family protein
11.8322 Ahg946158 allantoate amidohydrolase
14.0712 Ahg930309 indole-3-acetic acid inducible 2
17.5499 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
18.412 Ahg488432 CONSTANS-like 1
25.923 Ahg470177 Homeodomain-like superfamily protein
28.1603 Ahg485019 ubiquitin-conjugating enzyme 13
29.8329 Ahg947850 cycling DOF factor 2
30.0666 Ahg487518
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression