| Annotation |
|---|
| Description | jgi|Araly1|920146|scaffold_101427.1 |
| Sequence |
TCAGCAATCG ATAGAGGAAG ATGAATTATT TCCCAGACGA GGTTATAGAG CACGTGTTTG ACTTCGTAGC TTCTCACAAA GACAGGAACT CGATCTCTCT GGTCTGCAAA TCATGGCACA AGATCGAGAG GTTTAGTAGG AAGAACGTGT TCATCGGAAA CTGCTACGCC ATCAATCCAG AGAGATTAAT CGGGAGGTTT CCATGTCTCA AATCCTTAAC TCTTAAAGGG AAGCCTCATT TCGCTGATTT CAACTTGGTT CCTCATGAAT GGGGAGGTTT CGTGCTTCCT TGGATTGAAG CTTTGGCTAG GAGCCGTGTA GGGCTTGAGG AGCTGAGGTT GAAGCGAATG GTGGTAACAG ATGAAAGCTT GGAGCTTCTT TCACGTTCTT TTGCAAATTT CAAGTCTTTG GTTCTTGTCA GCTGTGAAGG ATTTACCACT GACGGCTTAG CTTCCATTGC TACTAATTGC AGGCATCTTC GTGAGCTGGA TCTGCAAGAG AATGAAATTG ATGATCATAG AGGTCAATGG CTGAACTGTT TTCCAGATAG CTGCACTACT CTTATCTCGT TGAATTTCGC CTGTCTTAAA GGAGAGACCA ATGTTGCTGC TTTAGAGAGG CTTGTTGCAA GGTCACCGAA TCTGAAGAGC TTGAAGTTAA ACCGTGCAGT ACCGCTTGAC GCACTTGCTA GGTTAATGAG TTGTGCGCCG CAGTTAGTGG ACTTAGGAGT AGGGTCTTAT GAGAATGAGC CAGATCCAGA ATCTTTTGCG AAACTCATGA CTGCCATTGA AAAATGCATA TCGTTAAGGA GCTTGTCAGG CTTTTTAGAG GTTGCTCCAC TCTGCCTCCC AGCGTTCTAC CCGATTTGTC AAAACCTTAT CTCGTTGAAC CTCAGCTATG CAGCCGAGAT CCAAGGCAAC CACCTCATTA AGCTTATTCA GCTTTGCAAG AGACTTCAAC GGTTGTGGAT ATTGGATAGT ATTGGTGACA AAGGACTTGT GGTCGTCGCT GACACATGCA AAGAGTTACA AGAGCTGAGA GTTTTTCCCT CCGATGTACA TGGTGAAGAA GATAACATTG CAGCTGTGAC TGAGGTCGGT CTAGTTGCAA TTTCTGCAGG TTGCCCTAAA CTTCATTCGA TTCTATACTT CTGCAAACAA ATGACAAATG CAGCGCTCAT AGCCGTGGCC AAAAACTGCC CAAACTTCAT CCGGTTCAGG CTATGCATTC TCGAGCCACA CAAACCTGAC CACATCACAT CTCAATCACT AGACGAAGGC TTTGGTGCGA TCGTACAAGC TTGCAAGGGT CTAAGACGAC TCTCTGTCTC CGGTCTCTTA ACCGACCAAG TCTTTCTTTA CATCGGTATG TACGCGGAGC AGCTCGAGAT GCTTTCAATA GCTTTTGCGG GGGACACTGA CAAAGGAATG CTCTATGTGT TGAATGGATG CAAAAAAATG AGGAAGCTGG AGATAAGGGA CAGTCCTTTT GGGAACGCTG CGCTTCTTGC TGACGTGGGT AGGTACGAGA CAATGCGATC CCTTTGGATG TCGTCTTGTG AAGTAACACT CGGTGGCTGC AAGAGGCTCG CGCAGAATTC GCCACGGCTC AACGTAGAGA TCATCAACGA GAATGAGAAT AATCGGATGG AACAGAATGA AGAAGACGAA AGAGAGAAGG TTGATAAACT TTACCTCTAC CGAACAGTGG TTGGGACTAG AAAAGATGCA CCACCATATG TTAGGATTCT TTAGTCTCTC CCATTTCCCA CTCC |
| Length | 1774 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 5072729.. 5074688 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G12820.1 |
| Description | auxin signaling F-box 3 |
| TAIR curator summary | Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots. |
| Alias | [AFB3][auxin signaling F-box 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg936983 | |
| 3 |
Ahg343993 | alpha/beta-Hydrolases superfamily protein |
| 5.47723 |
Ahg492916 | Major facilitator superfamily protein |
| 8.7178 |
Ahg480465 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases |
| 9.79796 |
Ahg489422 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 20.3224 |
Ahg473144 | plant U-box 17 |
| 25.4558 |
Ahg481620 | conserved peptide upstream open reading frame 6 |
| 28.3549 |
Ahg487009 | proteolysis 6 |
| 30.2159 |
Ahg929326 | SPA1-related 3 |
| 31.8434 |
Ahg482837 | AMP deaminase, putative / myoadenylate deaminase, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|