Detail



ID : Ahg922501

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922501|scaffold_103782.1
Sequence
CAATTCAACT AAACGAAAAG ATGTCAGTAG CTTCACCGAT TCAATGTATC AGGATTCTAA ATCCATCATC TTCCTCTTCT TCATCTTCTT CAACAGCTTC GTCGTCTTTT AGATTCTCAA CGACGACTAA GCCATGTGTA TTCATCATCA GATGTTCTCA GACAGAAGGT CCTTTAAGAA GGCCCTCGGC TCCTCCTACT CTCCGGGAGC CGCAAAAACC TGTTCCTCCA TCGCAGCCGT CTTCTGCTCC TCCTCCTCCT CCCCCGCCGC AGAAAGCTGT GGCTGTTGAT GGGAAGAGTG TAACTACGGT GGAGTTTCAG AGACAGAAGG CTAAAGAGCT TCAAGAGTAC TTTAAACAGA AGAAGCTTGA AGCTGCTGGT CAAGGTCCTT TTTTTGGTTT CCAACCCAAA AATGAGATCT CCAATGGAAG GTGGGCTATG TTTGGTTTCG CAGTTGGAAT GCTCACAGAG TATGCAACAG GATCAGACCT TGTTGATCAA GTTAAGATCC TTCTCTCGAA TTTCGGCATT GTAGACTTGG AATAATAAGA GTGTTGTTAT ATATAG 
Length566
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15029582.. 15030608
Download Sequence
A.thaliana
AGI-codeAT1G34000.1
Descriptionone-helix protein 2
TAIR curator summaryEncodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.
Alias[OHP2][one-helix protein 2]
Gene coexpression
MR
MR Locus Description
8.42615 Ahg943760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
16.1245 Ahg491144 catalase 2
19.6977 Ahg479910 Protein kinase superfamily protein
20.1246 Ahg925420 plastid transcriptionally active 4
21.7945 Ahg487310 Protein kinase superfamily protein
25.1595 Ahg494803 FtsH extracellular protease family
26.9258 Ahg496704 general control non-repressible 5
27.3496 Ahg474728
28.4605 Ahg914489 SPA1-related 4
28.4605 Ahg926404 Phosphoglucomutase/phosphomannomutase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression