Detail



ID : Ahg495512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495512|fgenesh2_kg.8__1328__AT5G54270.1
Sequence
ATATCCCATC TCTGATTCTC CAACCTCTCT TCTCATCCAC AAAATACTAA CATAAAAGTC AAAGTCCCTG AGACCAATAC TTTCACCAAA CAGCAAAAGA AGAAGAACAA CAACACTAAG CAAAAAAAAA AATCTCAAGC CGAGAGAGAC AATGGCATCA ACATTCACGA GCTCAAGCAG TGTTCTGTCT CCTACAACAT TCCTTGGCCA GACTAAAGCC TCAAGCTTTA ACCCTCTTCG TGATGTTGTC TCTCTCGGAT CTCCCAAATA CACTATGGGA AATGATCTTT GGTATGGACC AGACAGAGTG AAGTACTTAG GACCCTTTTC CGTCCAAACT CCGTCTTACC TCACCGGAGA ATTCCCCGGC GATTATGGTT GGGACACCGC CGGTTTATCT GCAGACCCTG AAGCCTTTGC CAAAAACAGA GCTCTTGAGG TGATCCATGG GAGATGGGCA ATGTTGGGAG CTTTTGGTTG CATAACCCCT GAAGTTCTTC AAAAGTGGGT CCGTGTGGAC TTCAAAGAAC CAGTCTGGTT CAAGGCCGGT TCACAAATCT TCTCCGAAGG CGGTTTGGAC TACTTAGGCA ACCCAAACCT AGTCCATGCT CAGAGCATTT TAGCCGTCCT TGGCTTCCAA GTCATCCTCA TGGGCTTGGT TGAAGGTTTC CGCATCAACG GTCTTGATGG TGTTGGCGAA GGCAACGACT TGTACCCCGG TGGACAATAC TTTGACCCGT TGGGTCTCGC TGATGATCCA GTTACTTTTG CCGAGCTCAA GGTGAAAGAG ATCAAGAATG GAAGATTGGC TATGTTCTCA ATGTTTGGCT TCTTTGTTCA AGCCATTGTT ACTGGAAAAG GTCCTTTGGA GAATCTCCTT GACCATCTCG ACAACCCCGT TGCTAACAAT GCATGGGCTT TCGCAACTAA GTTTGCACCT GGAGCTTAAA TTTTTAAGTC TTGATGTGAT TCTTGTAATG ATATGAACAT AACCTTTCTT GTTCCTCTCA AATTACAAAT CTCTATTTGC TATACACAGA AGAAGTCTCA AAAATACATG TCTCTCACAG CTAAATCTAC AATGCTCTCA ATCTAACATT TTGGGATCGG GATACTAATA CAAAGCTAAG TGG 
Length1133
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15418726.. 15420024
Download Sequence
A.thaliana
AGI-codeAT5G54270.1
Descriptionlight-harvesting chlorophyll B-binding protein 3
TAIR curator summaryLhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).
Alias[LHCB3][LHCB3*1][light-harvesting chlorophyll B-binding protein 3]
Gene coexpression
MR
MR Locus Description
1 Ahg930834 photosystem II light harvesting complex gene 2.1
1.41421 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
2.44949 Ahg482403 light-harvesting chlorophyll-protein complex II subunit B1
2.82843 Ahg478197 light harvesting complex photosystem II
3.4641 Ahg482401 photosystem II light harvesting complex gene B1B2
5.2915 Ahg473203 chlorophyll A/B-binding protein 2
6.63325 Ahg473204 chlorophyll A/B binding protein 1
7.48331 Ahg471781 light harvesting complex photosystem II subunit 6
8.66025 Ahg485905 photosystem I light harvesting complex gene 1
10.0995 Ahg932941 Arp2/3 complex, 34 kD subunit p34-Arc
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression