Detail



ID : Ahg478197

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478197|fgenesh2_kg.3__898__AT3G08940.2
Sequence
TACAAACCGC AAACGCGACA TAACTAACGA CGCCGGAGAT GGCTGCCACT TCAACCGCCG CTTCTGCTTC TTCAATCATG GGTACCCGGG TGGTTTCCGA CATTAGCTCC GGTTCAACCC GGTTCACAGC CCGGTTCGGA TTCGGAACTA AGAAAGCCGC TCCTAAAAAG GCTAAGACGG TTATCTCAGA CCGGCCTTTA TGGTTCCCAG GCGCAAAATC CCCAGAGTAT CTCGACGGTT CACTGGTCGG GGACTACGGG TTCGATCCTT TTGGTTTAGG TAAACCGGCG GAGTATCTCC AATTCGATTT GGACTCCTTG GACCAGAACC TCGCCAAGAA CTTAGCCGGA GACGTGATCG GGACCCGTAC CGAGGCGGTG GATCCCAAAT CGACGCCGTT TCAGCCATAC AGTGAAGTCT TCGGGCTACA GAGATTCAGA GAATGTGAGC TGATTCACGG TCGGTGGGCA ATGCTCGCCA CTCTCGGCGC TATCACCGTA GAATGGCTCA CCGGTGTTAC TTGGCAAGAC GCCGGCAAGG TAGAGCTAGT GGATGGATCG TCTTACTTAG GACAGCCATT GCCGTTCTCT ATCTCGACAT TGATATGGAT CGAAGTGTTA GTGGTCGGCT ACATTGAGTT CCAACGAAAC GCTGAGCTGG ACTCAGAGAA GCGTTTGTAT CCAGGAGGCA AGTTCTTTGA CCCGTTAGGA CTAGCATCTG ACCCGGAGAA GAAGGCTCAG CTTCAGCTAG CTGAGATCAA ACATGCTCGT TTAGCCATGG TTGGATTCTT GGGTTTTGCT GTTCAGGCGG CTGCAACCGG TAAAGGACCC CTCAACAACT GGGCGACTCA CCTTAGTGAC CCACTTCACA CCACCATTAT CGATACCTTC TCTTCCTCTT GATGTGGTGG CTTTTGTAAT GATGTAATGT CGCTATTTTA AAGAAAATTT GGCACCTTTT GTATAAACAG AA 
Length972
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3311348.. 3312422
Download Sequence
A.thaliana
AGI-codeAT3G08940.2
Descriptionlight harvesting complex photosystem II
TAIR curator summaryLhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II
Alias[LHCB4.2][light harvesting complex photosystem II]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
2.82843 Ahg495512 light-harvesting chlorophyll B-binding protein 3
4.24264 Ahg918978 photosystem I subunit D-2
4.47214 Ahg930834 photosystem II light harvesting complex gene 2.1
7 Ahg482403 light-harvesting chlorophyll-protein complex II subunit B1
7.48331 Ahg473203 chlorophyll A/B-binding protein 2
8.12404 Ahg471781 light harvesting complex photosystem II subunit 6
9.69536 Ahg936534 photosystem II light harvesting complex gene 2.3
9.84886 Ahg947862 Protein of unknown function (DUF1997)
12.4097 Ahg483311 Rhodanese/Cell cycle control phosphatase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression