Detail



ID : Ahg482403

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482403|fgenesh2_kg.4__1463__AT2G34430.1
Sequence
CAAACTTAAC TAAAAACCAT TTACTTGCAC CACACTCTCA CCGCAATGGC CGCCTCGACA ATGGCTCTCT CCTCTCCTGC TATGGCCGGA AAGGCCGTTA AGCTATCCCC GGCGGCCTCC GAAGTATTTG GAATCGGCCG AGTTACCATG CGCAAAGCCT CCAAACCCAC CGGTCCATCA GGCAGCCCAT GGTACGGATC CGACCGAGTC AAGTACTTGG GTCCATTCTC CGGTGAGCCT CCGAGCTACC TCACTGGAGA ATTCCCCGGT GACTACGGGT GGGACACTGC CGGTCTATCC GCAGACCCCG AGACCTTCGC CAGGAACCGT GAGCTAGAAG TTATCCACAG CAGATGGGCC ATGCTCGGAG CCCTAGGCTG CGTTTTCCCT GAGCTGTTGG CTCGCAATGG AGTCAAATTC GGAGAGGCAG TTTGGTTCAA GGCTGGTTCA CAGATCTTCA GCGATGGAGG ATTGGACTAC TTGGGCAATC CGAGCTTGGT CCACGCTCAG AGCATCTTAG CCATTTGGGC CACTCAAGTG ATCCTCATGG GAGCTGTTGA AGGCTACAGA GTCGCCGGAA ATGGCCCATT GGGAGAGGCA GAGGACTTGC TTTACCCAGG TGGCAGCTTT GACCCATTGG GCCTTGCTAC TGACCCCGAG GCGTTTGCAG AGTTGAAGGT GAAGGAGCTC AAGAACGGAA GGTTGGCTAT GTTCTCTATG TTTGGATTCT TCGTTCAGGC CATTGTCACC GGAAAGGGAC CGTTGGAGAA TCTTGCTGAC CACTTGGCCG ATCCAGTCAA CAACAACGCA TGGGCCTTCG CTACCAACTT CGTCCCCGGA AAGTGAGTTT AATATGTGAT CAAGTTGTGT GTATCTGGTT TGTTGAATCT TGGAAATGTG ATGCAGATTT CATCTCTTGT ATATTACTTT GTAAGTGTGT GAAATATTTA AGAAGCTTTA TGATATTGAT GGATCAGTCA CTTACTA 
Length987
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15488103.. 15489089
Download Sequence
A.thaliana
AGI-codeAT2G34430.1
Descriptionlight-harvesting chlorophyll-protein complex II subunit B1
TAIR curator summaryPhotosystem II type I chlorophyll a/b-binding protein
Alias[LHB1B1][LHCB1.4][light-harvesting chlorophyll-protein complex II subunit B1][LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX II SUBUNIT B1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg473203 chlorophyll A/B-binding protein 2
2.44949 Ahg495512 light-harvesting chlorophyll B-binding protein 3
2.82843 Ahg473204 chlorophyll A/B binding protein 1
3 Ahg930834 photosystem II light harvesting complex gene 2.1
5.65685 Ahg492051 protochlorophyllide oxidoreductase B
5.91608 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
7 Ahg478197 light harvesting complex photosystem II
7.74597 Ahg482401 photosystem II light harvesting complex gene B1B2
10.6771 Ahg471359 extensin-like protein
11.8322 Ahg490641 proline-rich protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression