Detail



ID : Ahg951815

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951815|scaffold_18500001.1
Sequence
TCTCTTCCCG TCGTCGGAGA CGGAGTTTAT GCCTATTGGC TCCTGAGGTT ATATTAAGCT TCGTTTTTAG TGGATTTTCT TCTTTTGAGA TATGGAACAA GATTACATCT GCTCAGGCTG CTACCAGTGT CGAGTTTTTT CATTGCAAGA AGCACTCGAT TGGCGGTTTC TTGTGCACTC AGATTTCCTT ATTGGCTCTT TCGTGAACTG CACTTACTGT CTCTTTTCCT CGAGTCTCTG AACCCCTTGA GTGAAATGCT G 
Length261
Protein Sequence
Protein Residue
Map Locationscaffold_185: 362.. 1834
Download Sequence
A.thaliana
AGI-codeAT5G45428.1
Descriptionconserved peptide upstream open reading frame 24
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF24 represents a conserved upstream opening reading frame relative to major ORF AT5G45430.1
Alias[CPuORF24][conserved peptide upstream open reading frame 24]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
19.1311 Ahg475161 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
21.5407 Ahg935146 phosphoenolpyruvate carboxylase 2
31.6228 Ahg912452 myb-like transcription factor family protein
34.7275 Ahg897156 thylakoid lumenal P17.1 protein
37.4166 Ahg496704 general control non-repressible 5
39.2046 Ahg915648 Disease resistance protein (TIR-NBS-LRR class)
42.1307 Ahg943760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
42.7083 Ahg484042 ribose-5-phosphate isomerase 2
43.8634 Ahg322444
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression