Detail



ID : Ahg348673

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348673|fgenesh1_pg.C_scaffold_5002065
Sequence
ATGAAGAAGG AGAATCTTGT TCCTCTTCGT CACACCATTT TCTCCGACCA TCTCACTCCT GTTCTCGCTT ACCGTTGTCT TGTCAAAGAA GATGATCAAG AGGCTCCAAG CTTTCTTTTC GAATCTGTTG AGCCAGGACA TCACTCTTCC ACTGTTGGAA GATATAGTGT CGTTGGAGCG CATCCGAAAA TGGAAATTGT GGCTAAGGAG AACAAAGTGA CAGTCATGGA TCATGTTAAA GGCACTAAGA CTACAGAGGA AGTTGAGGAT CCAATGATGA TTCCTAGAAG AATCTCAGAG ACTTGGAAAC CTCAATTGAT CGATGATCTT CCTGATGTTT TTTGTGGTGG ATGGGTTGGT TACTTTTCTT ATGATACTGT CCGCTATGCT GAAAAACGAA AGCTACCTTT CTCCAAGGCT CCGGTTGATG ACCGGAATTT GCCAGACATG CATCTTGGTC TTTATGATGA TGTGATTGTG TTTGATCATG TCGAAAAGAA AATCCATATA ATTCATTGGG TGAGGTTATC AGGAAACTCA TCATTTGATG ATGTTTATGG TAATGGTATG AAACACTTGG AAGAGCTTGT TTCGAGGATC AAATGCATTA ATCCCCCCAA GCTACCTTAT GGATCAGTGG ACTTACACAC AAATCAATTT GGCACTCCTT TGGAGAAATC TAGCATGACA AGTGATGCGT ATAAGAATGC TGTACTTCAG GCCAAAGAAC ACATACTGGC TGGAGATATC TTTCAGATTG TTTTAAGTCA AAGATTTGAG CGCCACACTT TTGCCCATCC GTTTGAAGTT TATCGAGCTT TGAGAATTGT GAACCCAAGT CCGTCTATGT GTTACTTGCA AGCAAGAGGT TGTATTCTAG TAGCTTCAAG TCCTGAAATT CTCACTAGAG TGAAGAAAAA CAAGATCGTG AATAGACCAC TAGCAGGAAC TGCAAGGCGA GGCAAGAGTT TCGAAGAAGA TCAAATGTTG GAGGAGACAC TTTTAAAAGA CGAAAAACAG TGTGCTGAAC ACATTATGCT CGTTGACTTG GGTCGCAATG ATGTTGGAAA GGTGTCCAAG AACGGCTCAG TGAAAGTAGA AAGGCTCATG AATATAGAGC GTTATTCTCA TGTCATGCAT ATTAGCTCAA CGGTGACTGG AGAGTTGCAA GAGAATCTGA CTTGCTGGGA CACTCTCCGT GCGGCTTTAC CAGTTGGAAC TGTGAAGGCT ATGGAGTTAA TCGATGAGCT AGAGGTGACT AGAAGAGGTC CGTACAGTGG TGGATTCGGT AGTGTCTCAT TCACTGGAGA CATGGACATA GCTTTGGCTC TTAGGACCAT TGTGTTCCCA ACACAAGCTC GTTACGACAC AATGTACTCA TACAAAGACA AAGACACGCC TCGCCGTGAG TGGATAGCTT ATCTGCAAGC AGGTGCAGGC ATTGTAGCCG ATAGTGACCC AGAGGATGAG CACCGTGAGT GCCAGAACAA AGCTGCGGGA CTCGCACGTG CCATTGACTT GGCTGAGTCT GCATTCGTTG ATAAAATTGA TACAACCATC TAG 
Length1563
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16717601.. 16720114
Download Sequence
A.thaliana
AGI-codeAT3G55870.1
DescriptionADC synthase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.2899 Ahg914231 Membrane trafficking VPS53 family protein
25.4755 Ahg893817 Pectin lyase-like superfamily protein
32.1714 Ahg913932
35.5246 Ahg350644 Lateral organ boundaries (LOB) domain family protein
42.4735 Ahg311505 YUCCA 9
53.2165 Ahg908588 transposable element gene
54.3323 Ahg908332
64.6916 Ahg937985
67.082 Ahg939587 CYCLIN D7;1
67.7717 Ahg472269 laccase 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression