Detail



ID : Ahg496236

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496236|fgenesh2_kg.8__2052__AT5G60870.1
Sequence
CAACAATGGC AGCGTTAAGC AACCGCCTAC GTATCTTCAC GCGCCGCTTC TCCTCCACCC GGACAACTCA AAGAAGTAGC GGAGGAGCTA CCACCAAGGT GCCCACACTC TACACAAGCC CAGATATCGA CTCGGATCCC ATCACTCTCC AGCTCTTCTC GTGGGGACGA GGCGCATCAG GTCAACTCGG CGGCGGAATC GAGGAGATTC GAATGTATCC GTCTCCGGTC GCTAATCTTC TCCTTCGCTC CGATCAATCC TTCTCTCTCG CCCAAACTCC TGGAAGAATC GACGCCGATT CATCGAGTTT CCCGATTGGA ATCTCTTGCG GCTTTTTCCA TTCGGGTCTA ACCATCGGTG GAGATCTATG GATTTGGGGC AAAGGTGACG GAGGTAGGCT AGGGTTTGGC CAAGAGAATT CGGTGTTCGT CCCCAATTTA AACCCGCTTT TCGAGGAACA TTCGATTCGA TGTATTGCTC TTGGTGGTTT GCATTCAGTA GCTTTAACAC ATCAAGGAGA GGTATTCACT TGGGGTTATG GTGGTTTTGG AGCGCTTGGA CATAAGGTTT ACACTAGAGA ACTCGTTCCT CGACGTGTTG ACGGCTCTTG GGATTGCAAA ATCTCTGCCA TTGCTACCAG TGGAACTCAT ACCGCTGCTA TTACCGAATC AGGAGAGCTG TATATGTGGG GAAGAGAAGA AGGGGATGGT AGATTAGGAC TTGGGCCAGG TCGAGGACCA AACGAAGGTG GTGGGCTTAG TGTTCCTTCA AAGGTCAAAG CTTTAACAGT TCCCGTAGCC TCTGTCTCAT GTGGTGGTTT TTTCACAATG GCTCTTACAA AAGAGGGACA ACTCTGGAAC TGGGGAGCAA ATTCCAATTA TGAGCTCGGG CGCGGTGATA ACTTGGGAGG TTGGGAACCA TTGCCGGTTC CCAGTTTAGA TAGTGTTCGT ATTACCCAGA TTGCTTGCGG TGGATATCAT TCTCTTGCCT TAACCGAGGA AGGTAAAGTA CTCTCATGGG GCCACGGTGG CCATGGCCAG TTGGGTAATT CCTCGTTGCG AAACCAGAAA ATTCCTACAG AAATCGAAGC ATTAGAAGAT AAAAAGATCG TCTTCATCGC TTGTGGAGGT TCCTCGTCTG CAGCGATAAC AGATGGTGGT GAACTCTGGA TGTGGGGAAA CGCTAAAGAT TTCCAGCTAG GAGTTCCAGG TCTCCCGGAG ATCCAAACAA CTCCGGTCGA AGTCAATTTC TTAACCGAAG AAGATGAGCG TCAACCACAC AAGGTTATCT CAGTTTCCAT TGGTGCTTCA CATGCTCTGT GTTTGGTCTC AAGATCACAT TAATAAACAC TTTGATAGAC GATA 
Length1364
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18549962.. 18552013
Download Sequence
A.thaliana
AGI-codeAT5G60870.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias[RUG3][RCC1/UVR8/GEF-like 3]
Gene coexpression
MR
MR Locus Description
15.6525 Ahg930298 Ribosomal protein S5/Elongation factor G/III/V family protein
35.609 Ahg316181 Major facilitator superfamily protein
41.4246 Ahg930126 FKBP-type peptidyl-prolyl cis-trans isomerase family protein
58.1378 Ahg483677 LOB domain-containing protein 18
82.9819 Ahg493511 Putative methyltransferase family protein
92.5635 Ahg487372 arginine-tRNA protein transferase 1
97.0773 Ahg934676 PATATIN-like protein 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression