Detail



ID : Ahg930298

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930298|scaffold_302755.1
Sequence
GTTTTGTAAA TTGTTAAGAG ATGGATGATT CTGAAGGTAG GAAAGTTAGG AACATATGTA TTCTGGCACA TGTAGATCAC GGTAAGACGA CTCTCGCTGA TCATCTAATT GCTTCTTCCG GTGGCGGTGT ACTTCATCCG AGGCTTGCCG GGAAGCTTAG GTACATGGAC TATCTTGATG AAGAACAGAG GCGTGCAATA ACGATGAAGA GCTCTTCGAT TTCTTTACGG TATAAGGACT ATTCTTTAAA CCTGATTGAT TCCCCTGGGC ATATGGATTT CTGTAGTGAA GTTTCGACAG CTGCTCGGTT AAGTGATGGG GCGTTGGTTT TGGTTGATGC TGTTGAAGGT GTACATATTC AGACGCATGC TGTGTTGCGT CAAGCTTGGA TTGAGAAGTT GACTCCTTGT TTGGTGCTTA ATAAGATTGA TCGGTTGATT TGTGAGTTGA GGTTGAGCCC TATGGAAGCG TATACCCGTT TGATTAGGAT TGTTCATGAG GTTAATGGGA TTGTGAGCGC GTATAAGTCG GAGAAGTATT TGTCGGATGT TGACTCTATA CTTGCTAGTC CTTCGGGTGA GTTGTCTGCT GAGAGTCTTG AGTTGTTGGA GGATGATGAA GAAGTTACTT TTCAGCCTCA GAAGGGTAAT GTGGTCTTCG TGTGTGCTTT GGACGGGTGG GGTTTCGGGA TTGCAGAGTT TGCTAATTTC TATGCTTCCA AGCTTGGAGC TAGTGCGACT GCGTTGCAGA AATCATTATG GGGTCCTCGT TATTATATTC CTAAAACTAA GATGATTGTA GGCAAGAAGT CTTTAAGTGC AGGAAGCAAG GCAAAACCAA TGTTTGTGCA GTTTGTGCTT GAGCCTTTGT GGCAGGTTTA CGAGGCAGCA CTAGATCCCG GTGGGGATAG AACCGTTCTT GAGAAAGTTA TCAAATCTTT CAATTTGTCT ATTCCACCAC GTGAACTTCA GAACAAGGAT CCAAAAAACG TGCTTCAATC AGTGATGAGC CGTTGGCTTC CTTTGTCGGA TGCAGTCTTG TCTATGGCTG TGAAACATCT GCCAGATCCC ATTGCAGCAC AGGCATATAG AATCCCGCGC TTGGTTCCAG AGAGGAAAAT TATCGGTGGT GATGATGTTG ATTCAAGTGT CCTTGCAGAA GCAGAGCTTG TTAGAAAATC AATTGAGGCT TGTGATTCTA GCCGTGACAG CCCTTGTGTT GTGTTTGTGT CGAAAATGTT TGCTATTCCC CTGAAAATGA TTCCTCAAGA TGGAAATCAC AGGGAGAGGA TGAACGGTTT AAATGACGAG GACAGTAAAA GCGAGTCGGA TGAGTGCTTC CTTGCATTTG CTAGGATCTT TAGTGGAGTT CTTCGCGCCG GGCAAAGAGT CTTTGTAATT ACCGCTCTAT ATGATCCCCT CAAGGGTGAA TCGTCTCAGA AGTACATTCA GGAGGCAGAA CTGCATTCCC TATATCTTAT GATGGGGCAA GGTTTAACAC CAGTAACTGA GGTGAAAGCC GGAAATGTAG TGGCCATAAG AGGGCTTGGA CCATATATAT CAAAAAGCGC AACACTTTCA TCTACTAGAA ACTGCTGGCC TTTAGCCAGC ATGGAGTTTC AGGTCTCTCC CACTCTTAGA GTTGCGATTG AACCATCGGA TCCTGCAGAT ATGAGTGCTT TGATGAAAGG TCTAAGACTT CTAAACCGAG CAGATCCATT TGTGGAGATT ACAGTGTCTG CTAGAGGAGA ACATGTGCTT GCTGCTGCTG GAGAGGTTCA TCTTGAAAGA TGCATTAAGG ATTTAAAAGA GAGATTTGCA AAAGTGAACC TAGAAGTCTC TCCGCCTCTC GTGTCCTACA GGGAGACCAT TGAAGGTGAT GGATCTAATC TTTTGGAAAG TTTGAGATCT CTAAGCTTGA ATACTTCGGA TTACATCGAG AAGAGAACTC CAAATGGCAG ATGCATTATC AGAGTACATG TCATGAAACT ACCGCACTCT CTAACCAAGC TGCTTGATGA GAACACTGAA TTGCTTGGTG ACATAATTGG AGGTAAAGGC AGTCATAGCG TTAAGATACT AGAATCCCAA AACCCAAGCC TCGGAGAAAA TGTGGATCCC ATCGAAGAAT TGAAGAAACA GTTGATTGAA GCTGGTGTTT CATCAAGTTC TGAAACCGAA AAGGATCGCG AAAAATGTAA AACCGAATGG TCGAAACTGC TCAAGAGGAT TTGGGCGCTT GGTCCAAGAG AAAAAGGTCC AAACATACTA TTCGCTCCAG ATGGTAAAAG AATCAGAGAG GATGGATCAA TGCTCGTAAG AGGCTCTCCT CATGTCTCTC AGAGACTTGG CTTCACAGAA GATTCTACTG AGACACCTTC AGATATATCT GAAACAGCAT TGTACACCGA AGCACTGACT CTCGAGAGCA GCATCGTCTC GGGCTTTCAG CTAGCGACAG CATCAGGACC TCTATGCGAT GAACCAATGT GGGGATTAGC TTTCACCATT GAGTCTCATC TCGCTCCCGC AGAAGATTTT GAAACAGATA AACCCGAAAA CTTTGGCATT TTCACAGGAC AAGTCATGAC AGCTGTCAAA GACGCATGTA GAGCCGCCGT GCTTCAGACA AATCCACGTA TTGTCGAAGC AATGTACTTC TGTGAACTGA ACACGGCACC TGAGTATCTT GGTCCGATGT ACGCGGTTCT AAGCAGAAGA CGAGCTAGAG TGCTCAAGGA AGAAATGCAA GAAGGGTCAT CCCTGTTCAC TATCCACACG TACGTGCCTG TTTCGGAAAG CTTCGGTTTT GCTGACGAGC TAAGAAAAGG AACGTCTGGT GGTGCAAGTG CTCTGATGGT TCTGAGCCAT TGGGAAATGC TCGAGGAAGA TCCCTTCTTT GTTCCCAAAA CCGAAGAAGA AATCGAGGAG TTTGGTGATG GAGCAAGCGT TCTTCCGAAC ACAGCGAGGA AGCTCATCAA CGCCGTACGT CGCAGGAAAG GATTACACGT TGAGGAGAAA GTGGTTCAAC ACGCCACTAA ACAAAGAACC TTGGCTCGTA AAGTTTGAGT TTTTTTTTTT GTCTTCCT 
Length3088
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9724288.. 9727375
Download Sequence
A.thaliana
AGI-codeAT3G22980.1
DescriptionRibosomal protein S5/Elongation factor G/III/V family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8 Ahg482489 VQ motif-containing protein
12.3288 Ahg925161 RNA-binding protein 1
15.6525 Ahg496236 Regulator of chromosome condensation (RCC1) family protein
23.3666 Ahg494291 Syntaxin/t-SNARE family protein
26.7769 Ahg484196 Galactose oxidase/kelch repeat superfamily protein
32.218 Ahg926973 VPS35 homolog B
58.0431 Ahg472338 squamosa promoter binding protein-like 14
69.5414 Ahg478603 nuclear factor Y, subunit C11
70.3562 Ahg488886 PRLI-interacting factor, putative
78.3709 Ahg939070 ARABIDILLO-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression