Detail



ID : Ahg925548

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925548|scaffold_201109.1
Sequence
GAGAATATCT GGAGTTCAGT ATGTCTGGAA GCACAGGAGA ACGTTCTTTT GCTGATATTA TTACCAGTAT TCGATACTGG GTCATTCATA GCATTACTAT ACCTTCCCTA TTCATTGCGG GCTGGTTATT CGTCAGCACC GGTTTAGCTT ACGATGTGTT CGGGAGCCCT CGTCCAAACG AGTATTTTAC AGAGAGCCGA CAAGGCATTC CATTAATAAC AGGCCGTTTT GATCCTTTGG AACAACTCGA CGAATTTATG CGCTGGTTGG CTGTTCATGG ACTAGCTGTA CCTACCGTTT CTTTTTTGGG AGCTATGACA CAATCAAATC CGAACGAACA AAGTGTTGAA TTAAATCGTA CCAGTCTCTA TTGGGGGTTA TTACTCATTT TTGTACTTGC TGTTTTATTT TCGAATTATT TCTTCAATTA AGAAAAGAGC GTAGAATAAT A 
Length451
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8197437.. 8197995
Download Sequence
A.thaliana
AGI-codeATCG00580.1
Descriptionphotosystem II reaction center protein E
TAIR curator summaryPSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized.
Alias[PSBE][photosystem II reaction center protein E]
Gene coexpression
MR
MR Locus Description
14 Ahg925462 photosystem II reaction center protein J
14.5602 Ahg907865 photosystem II reaction center protein B
18.3303 Ahg475560 photosynthetic electron transfer A
18.7617 Ahg475584 ATP synthase subunit alpha
21.4942 Ahg925489 ATP synthase subunit C family protein
24.1868 Ahg952678 Cytochrome C assembly protein
26.2488 Ahg907872 unfolded protein binding
27.4955 Ahg952681 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
27.6586 Ahg907863 photosynthetic electron transfer B
29.5635 Ahg925497 photosystem II reaction center protein A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression