Detail



ID : Ahg473685

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473685|fgenesh2_kg.1__3639__AT1G35560.1
Sequence
CAAGTTTGTT TGTTAGTTTA TTCCATTTTT TTGTGTTTTT TTTTCCCATA ATTTATAAAT TTTATAATCA ATGGAGTCCC ACAACAACAC CACTGGTTCG GCCCATCTGG TCCCATTCAT GGGACCAATC TCCGGTTCAG TAACAACCAC CGCTCAAAAT TCCACTACCA CCACCGTCTC GGCCGCTAAA ACACCGGCCA AACGACCCTC CAAGGACCGC CACATCAAAG TAGACGGTCG CGGCCGGAGG ATACGTATGC CGGCTATCTG CGCGGCGCGT GTCTTCCAAC TAACACGTGA GTTACAACAC AAATCAGACG GCGAGACTAT AGAGTGGCTG CTCCAACAAG CGGAGCCGGC TATCATCGCC GCCACCGGAA CCGGAACCAT ACCGGCGAAT ATCTCTACTT TGAACGTCTC TCTCCGAAGT AGTGGCTCTA CCCTCTCAGC TCCACTGTCT AAATCTTTCA ACATCGGAAG AGCTGCTCAA AACGCTGCCG TTTTCGGGTT CCAGCAACAG CTTTATCCTC CTCATCACAT CATGACAGAT TCTTCTTCTT CTTCTCTTCC CAAAATATTC CGTGAAGAAG ATCTCTTTAA AGATCCTAAT TCCCTCGATC AAGAACCCGG TTCAAGATCG CCTAAACCGG GATCCGAAGC TCCTGATCAA GATCCGGGTC TAACCCGGTC AAGAACACAA AACATGATAC CGCCGATGTG GGCAGTGGCG GCGCCAACGC CAGCCTCCAC AAACGGAGGT AGTGCGTTTT GGATGTTACC AGTCGGAGGA GGAGGTCCGG CCAACGTTCA GGATCCATCA CAGCACATGT GGGCGTTTAA TCCGGGTCAT TACCCGGGTC GAATCGGGTC GGTTCAGCTA GGGTCTATGT TAGTGGGAGG TCAACAATTA GGGTTAGGTG TTGCTGATAA TAACAATTTG GGGCTATTTT CCGGCGGAGG AGGAGGCGGT GGTCGGGTTG GTCTTGGAAT GAGTCTAGAG CAAAAACCTC AACATCAAGT GAGTGATCAT GCTACTGAAG ACCAAAATCT TACTATTGAT GGTTCTCCTT GAAGAGACGT CATAATTTTT TTGGTTTTTA AAAAGTGTGA ATGTGTGATT TATTGCAACT TTTGTTGAGG ACTCCGATGT TAATATGGGT TTTAGGGTTT GCTTTTCGGG ATTGCCAAAT TGTTATTTTA AAAAATGGAA GTTTTTTTCG TTGCACCAAA GATAAAATGA GTTTTGCAAC TCTTTTTATT TGATAAAAAA GCATGTCACT GAAGAGTGAA GTAAATATAG TTGAATCTAT GGGTAACATA ATGAACAAAA GAATATATTA AATATTTATC 
Length1350
Protein Sequence
Protein Residue
Map Locationscaffold_1: 16502249.. 16503731
Download Sequence
A.thaliana
AGI-codeAT1G35560.1
DescriptionTCP family transcription factor
TAIR curator summary
Alias[AtTCP23][TCP23][TCP domain protein 23]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg947850 cycling DOF factor 2
7.34847 Ahg488432 CONSTANS-like 1
7.93725 Ahg493346 ERD (early-responsive to dehydration stress) family protein
11.4891 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
16.2481 Ahg926642 homology to ABI1
17.0294 Ahg474897 Glutaredoxin family protein
17.2337 Ahg484500 chloride channel B
17.2916 Ahg484524
18.9737 Ahg902003 Major facilitator superfamily protein
21.8174 Ahg477472 CONSTANS-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression