Detail



ID : Ahg933344

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933344|scaffold_401332.1
Sequence
TCCTCCTCTC AAGAACCTCC TCCAATGGCG AGAGTTCTAG TCTCGTCTCC CTCTTCATTC TTCGGTTCAC CGTTGATTAA ACCGTCGTCG TCTCTCCGTC ACAGTGGAGG AGGAGCTCAA TTTCTACCAT ACCGGAGTAA TAATAACAAG CTTTTCACTA CTTCAACCAC CGTACGATTC AGCTTAAACG AGATTCCTCC TTTCCATGGA TTGGATTCAT CGGTAGACAT CGGAGCGATT CTCACCAGAG CTGAGTCTCT TCTTTATACT ATAGCTGACG CCGCCGTTGT TGGTGCTGAT TCCGTCGTTT CTACTGATTC CTCCGCCGTG CAGAAGAGTG GTGGTTGGTT TGGTTTTATC TCCGATGCTA TGGAATTGGT TCTTAAGATT TTGAAGGATG GATTATCAGC GGTTCATGTA CCGTATGCTT ATGGATTTGC GATTATCTTG CTTACGATTA TCGTCAAAGC AGCGACTTAT CCTTTGACTA AGCAACAGGT TGAATCGACA CTAGCGATGC AAAATCTTCA ACCGAAAATC AAAGCGATTC AACAACGTTA CGCAGGGAAT CAGGAGAGAA TACAACTAGA GACATCGCGC TTGTATAAAC AAGCTGGTGT AAATCCATTG GCAGGTTGCT TACCAACTTT AGCTACCATA CCAGTTTGGA TTGGTTTATA CCAAGCTCTC TCCAACGTGG CCAACGAGGG ATTGTTTACA GAAGGTTTCT TTTGGATTCC CTCTCTGGGT GGACCAACAA CTATAGCTGC TCGGCAGAGT GGATCCGGCA TATCATGGCT TTTTCCGTTT GTGGACGGGC ATCCACCATT GGGATGGAAT GACACTGCAG CTTATCTTGT TCTACCTGTT CTCCTTATTG CCTCCCAATA TGTGTCAATG GAGATTATGA AGCCTCCTCA AACAGATGAT CCTGCCCAAA AGAATACGCT TCTTGTTTTC AAGTTTCTTC CACTCATGAT CGGATACTTT GCATTGTCTG TCCCATCAGG ATTATCTATC TACTGGTTCA CAAATAATGT ACTTAGTACC GCCCAACAAG TATATCTGCG TAAACTTGGT GGTGCAAAGC CTAATATGGA TGAAAACGCA AGCAAAATAA TAAGTGCGGG ACGGGCAAAG AGATCTATTG CTCAGCCTGA CGATGCTGGC GAAAGATTTA GACAACTAAA AGAGCAAGAG AAGCGTAGCA AGAAGAACAA GGCTGTTGCA AAAGATACAG TTGAATTGGT AGAAGAATCT CAGTCTGAAT CAGAAGAAGG GTCTGATGAT GAGGAAGAAG AGGCTCGCGA AGGAGCATTA GCTTCAAGCA CTACAAGCAA GCCGCTTCCT GACGTTGGGC AACGAAGAAG CAAAAGATCA AAGCGGAAAC GCACTGTATA GAACCAAAAT TGCAAGCAAG G 
Length1421
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12414522.. 12417061
Download Sequence
A.thaliana
AGI-codeAT2G28800.1
Description63 kDa inner membrane family protein
TAIR curator summarymember of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.
Alias[ALB3][ALBINO 3]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg940830 elongation factor family protein
8.7178 Ahg475077 Translation elongation factor EFG/EF2 protein
9.21954 Ahg326886 DEAD box RNA helicase (RH3)
9.8995 Ahg946135 RAB GTPase homolog E1B
18.1659 Ahg478862 Aldolase-type TIM barrel family protein
22.8035 Ahg490399 Albino or Glassy Yellow 1
23.8118 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
24 Ahg482018 FtsH extracellular protease family
25.219 Ahg481465 glycine decarboxylase P-protein 2
26.3059 Ahg495389 FTSH protease 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression