Detail



ID : Ahg480887

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480887|fgenesh2_kg.3__3588__AT2G20570.1
Sequence
GAAGAAAGAG ACTTACTTTG GATATCAAAC ATGTCTAGCT CTCTATTCTA AGTCTACCCT ATCTATAACA TACATAAATC TCTCTCTCTC TCCGATTATA TTTGGATCTA CAAGTGAAGA TTGATCGATG TTAGCTCTGT CTCCGGCGAC AAGAGATGGT TGCGAGGGAG CGTCAGAGTT TCTTGATACA TCGTGTGGAT TCACGATCAA CCCGGAGGAG GAGGATGAGT TTCCGGACTT TGCTGACCAC GGAGATCTTC TTGACATCAT CGACTTCGAC GATATATTCG GTGTCGCCGG AGATGTGCTT CCTGACTTGG AGATCGACCC CGAGATCTTA TCCGGGGATT TCTCTGATCA CATGAACGCT TCTTCAACGA TTACTACGAC GTCGGATAAG ACTGATAGTC AAGGGGAGAC TAACAAGAGT ATTTCAGGGA AAGGTGAAGA AGTTGTAAGC AAAAGAGACG ATGCTGCGGC GGAGACGGTG ACTTATGACC GTGAAAGTGA CCGGAAAAGG AAGTATTCGT CTTCAGCTTC TTCCAAGAAC AATCGGATCA GTAACAACGA AGGGAAGCGA AAGGTGAAGG TGGATTGGAC ACCAGAGCTA CACAGGAGAT TCGTGGAGGC AGTGGAACAG TTAGGAGTGG ACAAAGCTGT TCCTTCTCGA ATTCTGGAGC TTATGGGAGT CCATTGTCTC ACTCGTCACA ACGTTGCTAG TCACCTCCAA AAATATAGGT CTCATCGGAA ACATTTGCTA GCTCGTGAGG CCGAAGCGGC TAATTGGACA CGTAAAAGGC ATATCTATGG AGTAGACACC GGAGGTAATA TTAATGGTCG GAGTAAAAAT GGATGGCTTG CACCGGCACC CACTCTCGGG TTTCCACCAC CTCCACCTGT CCATCACCAT CATTTTAGAC CCTTGCATGT GTGGGGACAT CCCACGGTTG ATCAGTCCAT CATGCCGCAT GTGTGGCCAA AACACTTACC TCCACCTTCT ACCGTCATGC CTAATCCGCC GTTTTGGGTC TCCGATTCTC CATATTGGCA TCCAATGCAT AACGGGGCGA CTCCGTATTT GCCGACCGTA GCTACGAGAT TTAGAGCACC GCCGGTTGCC GGAATCCCAC ATGCTCTGCC GCCACATCAC ACAGTGTACA AACCAAATCA TGGCTTTGGT GGTGCTCGTC CTCCGGTGGA CTTACATCCG TCAAAAGAGA GCGTGGATGC AGCCATAGGA GATGTATTAA CGAGGCCATG GCTGCCACTT CCGTTGGGAT TGAAGCCACC GGCTGTTGAC GGTGTTATGA CGGAGCTTCA CCGTCACGGT GTCTCCGAGG TTCCTCCGAC AGCGTCTTGT GCCTGAAACG CACAAGCGCC GTAGGCAAGC CGAACCAAAC AAAATTCGAC GACATGTCTT TCAATTATTG TACCTTTATT TTTCCAAGGG TTGTTTTTGT TTTTTTGACC CTTGTTGAGT GTTGAGAGTT TAGGGTCTCT TTACTTAATC GTCCCATGTG ACTAATAAGG AGCCTTTTCA TATGTATCTC TATTAACGCA AATAAATGAC ATATAT 
Length1576
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22549114.. 22551693
Download Sequence
A.thaliana
AGI-codeAT2G20570.2
DescriptionGBF's pro-rich region-interacting factor 1
TAIR curator summaryEncodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Alias[ATGLK1][GLK1][GPRI1][ARABIDOPSIS GOLDEN2-LIKE 1][GOLDEN2-LIKE 1][GBF's pro-rich region-interacting factor 1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg490167 photosystem II subunit Q-2
17.6068 Ahg491882 Photosystem I reaction centre subunit IV / PsaE protein
20.1246 Ahg486624 photosystem I light harvesting complex gene 2
24.3311 Ahg922093 photosystem I subunit K
28.3725 Ahg474340 photosystem I subunit H2
35.6651 Ahg474626 photosystem I subunit G
36.565 Ahg473640 photosystem I subunit F
38.6782 Ahg470689 photosystem II subunit P-1
39.5727 Ahg471781 light harvesting complex photosystem II subunit 6
40.9878 Ahg478197 light harvesting complex photosystem II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression