Detail



ID : Ahg482968

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482968|fgenesh2_kg.4__2028__AT2G39470.2
Sequence
ATCCACATGT TAATGAATGG AGAAGCAAAG AAATGACGAA AATCAGAAAT GTCTTATCCA CACACAAGAA CACTAAGGCA ATGTTCATTG ATCTCGTCTA AAGTCTTGTG AATTGTAGCC ATTATGGCAG CAGTCTCGTC ACTCTCAATA CGCTATGGTG TCTCACCAAC AATCTCCCAC AAGACAGAGA TTCTCTGTCC AAATCCATCA CTCAAAGCTT GTTTACTTTC ATCCGCTTAC CAAAAAGGCA GCGGAAGCAA TTGGAAGAGA AGGCAAGCTC TTGTGGGAGT AGGAACCTTA GTGGCAACTT CAATTCCAGC AGCTTTGCTT CTTGCTGAAG AGATACCAAA AAGCTACTCG CCTTTTGTGG ATCGAGAAGA CGGGTATTCT TATTATTACC CATCAGACTG GAGGGAATTT GACTTCAGGG CGCACGATTC AGCCTTCAAA GATAGATACC TGCAACTGCA GAATGTGCGG GTCAGGTTCA TACCAACCGA GAAAAACGAC ATCCGTGAAG TAGGTCCTAT GGAAGAGGTG GTTTATGATC TAGTGAAGCA TAAGTTTGCA GCACCAAACC AAGTAGCTAC TATCTACGAT ATGAAAGAGA GGGTGGAAGA TGGAAGGAAC TATTACACGT TTGAGTATGG ACTAAGAACT CCCATCTATG CAACCACTTC CTTTGCAACA GTGGCAGTTG GAAACAACAG ATACTATACA CTCATAGTTG GAGCAAATGA GAGGAGGTGG AGGAAAGTGA AAAAGCAACT TCAAGTTGTG GCTGACTCTT TGAAGATCCT TGAGATTTGA CAAACACAAG AAACATCTTT ATGTTACTCC TATCTATCTT TCTCTCTCTG TGGTTACATA ATTGTATGTA GATGACAATT TGATGTATTC CCATCTTCTC CACAACTCCA ACGATGTTTT TGGCATTGTG GCTTGTGAGT TGGATTTTGA GCTGGTTCAG TAATTGAATC AAACTTGCAA ATAAAGTGCA TATAATGTAT TTAC 
Length1014
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18178222.. 18179901
Download Sequence
A.thaliana
AGI-codeAT2G39470.1
DescriptionPsbP-like protein 2
TAIR curator summary
Alias[PnsL1][PPL2][Photosynthetic NDH subcomplex L 1][PsbP-like protein 2]
Gene coexpression
MR
MR Locus Description
12.6886 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
15.0997 Ahg494136 Ribulose bisphosphate carboxylase (small chain) family protein
18.8944 Ahg487785 peroxisomal NAD-malate dehydrogenase 2
23.2379 Ahg496993 ferredoxin-NADP(+)-oxidoreductase 1
27.3679 Ahg472228 ferredoxin-NADP(+)-oxidoreductase 2
31.0644 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
31.749 Ahg943629
34.8568 Ahg484369 Plastid-lipid associated protein PAP / fibrillin family protein
38.7685 Ahg471025 chloroplast RNA binding
39.6989 Ahg472262 Cupredoxin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression