Detail



ID : Ahg490080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490080|fgenesh2_kg.6__3214__AT4G04210.1
Sequence
AAAAAAGAGA ATGTCTTCGA AAGACAAGAA ACCGGCGAGA CCATCGACTA GTCGTGGTGG AGTCCGAACT CTTTCCGATC TTAATCGTAG GTCTGGTCCA GATTCCGACA GTGATTCCGA TGGACCTCAA GAATACTACA CCGGCGGTGA AAGAAGTGGT ATGCTTGTTC AAGATCCATC GAAAAAAGAT GATGTTGATG AGATATTTAA TCAAGCTAGA CAATTAGGAG CTGTGGAAGG ACCTCTTGAG CCTCCTTCGA GTTCAAGGAG TTTCACTGGA ACTGGGAGAT CGCTCTCTGG TGAAAATATG TCTACTGGTC TTCAACAGCC TGAGCCTGTG GTTCACAACA TTGTTTTCTG GTCTAATGGA TTCACTATAG ATGATGGTCC TTTGAGGAAA TTGGATGATC CTGAGAATGC ATTGTTTCTC GAGAGCATTC GAAAGTCTGA GTGCCCGAAA GAGCTTGAGC CTGCAGATAA AAGAGCCCCG GTTCATGTCA ATTTGATGCG AAGGGAAGAG AAATGCCCTG AAAGACAGAA ACGTAGGGTT TCATTTCAAG GTGTTGGAAG AACTCTAGGT GGTAGCAATG ATGGCAGCGG AAGTAGCTCC CCTGTTGCTC CAGACTCCGC TGCTATTCCC ATCCAAACCA ACGAAACCGT ATCAGCACCA CCTCCAAGTC TTGTAATAGA TGAAACTATT CCAATCACAT CGATACAGCT TAGACTAGCG GATGGGACAC GTCTGGTGGG TAAGTTCAAT CACCATCACA CGGTCAACGA CATTCGCGGT TTCATTGACT CCTCTCGTCC TGGAGCTCCG GTGAACTACC AGCTTCAGAC AATGGGATTC CCACCTAAGC CTTTGACTGA TCTCACTCAG ACCATCGAAG AAGCTGGTCT GGCCAACTCT GTCGTTCTTC AGAAATTCTA GAAAATTCTA CAAGGTTTGT TCTTTTTTGT CTTTCTATAT GTATTATTAT GAGATCTCCA TAACTGTTAT AGTAACCAGA TCTTTAAAAT GTAAGTTACT TCTTCGATTT GTATACGCAG CATAA 
Length1055
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21002980.. 21004520
Download Sequence
A.thaliana
AGI-codeAT4G04210.1
Descriptionplant UBX domain containing protein 4
TAIR curator summaryArabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4)
Alias[PUX4][plant UBX domain containing protein 4]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg490053 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
7.61577 Ahg491430 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
11.6189 Ahg491117 tonoplast monosaccharide transporter2
17.8326 Ahg942000 pseudo-response regulator 5
24.2487 Ahg946646 phytochrome D
25.2982 Ahg923649 Cation efflux family protein
27.0555 Ahg922379 Glycosyl hydrolase superfamily protein
27.4955 Ahg949787 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
28.6182 Ahg483346 cold regulated 15b
31.9374 Ahg483978 B-box type zinc finger protein with CCT domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression