Detail



ID : Ahg492197

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492197|fgenesh2_kg.7__1630__AT4G26150.1
Sequence
ATGGGTTCGA ATTTTCATTA CACTATAGAT CTCAATGAAG ATCAAAACCA TCAACCTTTT TTCGCTTCTC TTGGATCCTC TCTTCATCAT CATCATCAAC AACAACATTT TCATCACCAA GCTTCTTCTA ATCCCTCTTC TTCGATGTCA CCGTCTCTTT CCTACTTTCC TTTCTTGATC AACTCTCCCC AAGATCAAGT TGGGTACAAC AATAACACTT TTCATGATGT TCTTGATACC CATCTCTCTC AACCTCTCGA GACCAAGTTT GTATCTGATG GTGGTTCATC ATCAAGTGAT CAAATGGTGC CAAAGAAGGA GACACGACTA AAATTGACGA TAAAGAAGAA ATATAATCAT CAAGACCAAA CCAATCTTCC TCAATCCCCG ACAAAAGATA AGGCAGGAAC TAATTCGCTC AAGTGGATAT CTTCGAAGGT GAGATTGATG AAGAAGAAAA AGGCCATTAT TACCACCACC GACAGCAACA AACAACACGC TAATAACGAC CAATCCTCAA ACCTAAGCAA TCTGGAAAGA CAGAATGGTT ATAACAACAA TTGCGTGATT AGGATTTGCT CCGATTGTAA CACAACCAAG ACTCCTCTTT GGAGAAGTGG TCCGAGAGGT CCCAAGTCTC TTTGTAACGC TTGTGGAATA AGGCAAAGAA AGGCGAGGCG GGCCGCTATG GCCACGGCAA CTGCAACCGC AATCTCTGAC GTATCACCAC CTCTCATGAA GAAGAAGATG CAAAACAAGA ACAAGATATC AAATGGAGTT TATAAACCCT CCTCTCCTTC GGCTCTAAAG GTAAACATGT GTAAGAGAAT GATCACACTA GAGGAGACCG CAGCAGCCGA GGATTTGGAG ACTCAGAGCA ACTCCACGAT GTTATCACCT TCTTCATCTT CAGACAAGAA TTATTTCGAT GATCTAGCAA TAATCTTGAG CAAAAGTTTA GCTTATCAGC AAGTTTTCCC TCAGGATGAG AAGGAGGCTG CCATTTTACT AATGGCTCTA TCGCACGGAA TGGTTCACGG GTGATTATTT TAATTATTTT TATTATAACT TACCTGCTTA AGAAATTAGG GAGTTAATAT AAACCATACC ATAATCCCTG ATACCAAATA ATATCTAGAA TATTAATTAG TTTGGTGAAA ATTTTGTTTC TTGCCGTGAT ATATATATCA GTCAGTCCAA CTTTATAATA AGAGAATGTT GGGGTTTACT AGATTTTGTA TGGAAGGCTT GTGGTTTTTT TTTATGGAAC TTGATATCCC GAGAATGTGG TTGTTCTTGT TC 
Length1302
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6300630.. 6302332
Download Sequence
A.thaliana
AGI-codeAT4G26150.1
Descriptioncytokinin-responsive gata factor 1
TAIR curator summaryEncodes a member of the GATA factor family of zinc finger transcription factors.
Alias[CGA1][GATA22][GNL][cytokinin-responsive gata factor 1][GATA TRANSCRIPTION FACTOR 22][GNC-LIKE]
Gene coexpression
MR
MR Locus Description
14.7648 Ahg485512 lipid transfer protein 5
23.5372 Ahg326886 DEAD box RNA helicase (RH3)
27.9285 Ahg342019 actin 2
30.6268 Ahg480837 Tetratricopeptide repeat (TPR)-like superfamily protein
33.9853 Ahg940830 elongation factor family protein
41.0731 Ahg479886 Nucleic acid-binding proteins superfamily
43.8178 Ahg482993 Eukaryotic aspartyl protease family protein
45.299 Ahg920472 Inorganic H pyrophosphatase family protein
46.0435 Ahg471868 high chlorophyll fluorescence phenotype 173
55.8211 Ahg331125 Leucine carboxyl methyltransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression