Detail



ID : Ahg918978

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918978|scaffold_100259.1
Sequence
AGAGAAAGGA AACAGAAGAA ACTATGGCAA CTCAAGCCGC CGGAATCTTC AGCCCCGCCA TAACAACCAC TACTTCCGCC GTCAAGAAAC TCCACCTCTT CTCAACAAGC CACCGTCCCA AGTCTCTCTC CTTCACCAAA ACCGCCATCC GCGCCGAGAA AACAGAGTCC TCCTCTGCTG CCCCAGCCGT GAAAGAAGAA GCTCCGGTTG GATTCACTCC CCCGCAGCTA GACCCAAACA CACCATCACC AATCTTCGCC GGAAGCACAG GAGGTCTCCT CCGTAAAGCA CAAGTAGAGG AATTTTACGT CATCACATGG AACTCACCGA AGGAACAAAT CTTTGAGATG CCAACAGGAG GAGCTGCGAT AATGAGAGAA GGACCGAATC TGTTGAAACT AGCGAGGAAA GAACAGTGCT TGGCTTTAGG TACGAGGTTG AGGTCTAAAT ACAAGATCAC TTACCAGTTT TACAGAGTGT TCCCTAACGG AGAGGTTCAA TATCTTCACC CGAAAGATGG AGTTTATCCA GAGAAAGCGA ATCCAGGAAG AGAAGGTGTT GGACTAAACA TGAGATCCAT CGGTAAAAAT GTTAGTCCCA TTGAGGTTAA ATTCACTGGA AAACAATCTT ATGATTTGTA AGGTTTGATT TCGTATTTTT A 
Length661
Protein Sequence
Protein Residue
Map Locationscaffold_1: 853659.. 854307
Download Sequence
A.thaliana
AGI-codeAT1G03130.1
Descriptionphotosystem I subunit D-2
TAIR curator summaryEncodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2)
Alias[PSAD-2][photosystem I subunit D-2]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg478197 light harvesting complex photosystem II
5.09902 Ahg473640 photosystem I subunit F
7.2111 Ahg471781 light harvesting complex photosystem II subunit 6
8.18535 Ahg497524
8.3666 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
9.79796 Ahg472386
10.3923 Ahg490167 photosystem II subunit Q-2
13.4164 Ahg495512 light-harvesting chlorophyll B-binding protein 3
14.2829 Ahg490280 photosystem I subunit D-1
16.0935 Ahg474626 photosystem I subunit G
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression