Detail



ID : Ahg906179

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906179|Al_scaffold_0003_3307
Sequence
ATGTCGACTC GAATAACTCC TGGTGTAGGA GCTAATCTTC TCGGCCAACA CGCCACTGAA AGGAACCAAG ACGCCACCAT CTACGTCGGA AATCTCAGTC CTCAGCTTTC TGAAGATTTG CTTTTGGAAT TGTTCGTACA AGCCGGACCA GTTGTTAGCG TCTTTATTCC AAAAGATAAG GTGACAAATC TTCAACAAAC ATTTGGATTC GTTCAATTCC GTAATGAGGA AGATGCTGAC TATGCAATTA AGGTTTATAA CATGATTAAG CTCTATGGGG AGCCTATACG TGTTAAAAAG GCATCTCAAG ATAAGAAGAG CTTGGATGTT GGTGCTAACC TTTTTATTGG AAACCTTGAT CCTGATGTGG ATGAAAAGAT GTTGTATGAT ACTTTTAGCG CGTTTGGTAT GGTTGCTGAT CATCCTAAGA TAATGCGAGA TCCCGATACT GGAAACCCAC GAGGTTTCGG TTTCATTAGC TATGACTCTT TTGAGGCATC TGATGCTGCT ATTGAGGCAA TGACTGGACA ATATCTGAGT AGTCGTCAAA TAACAGTCTC TTATGCATAC AAGAAAGACA CCAAAGGAGA GCGACACGGT ACTCAAGCAG AGAGGCTTTT GGCTGCTACA AATCCAAGTT CCCAAAGAAG CAGACCCCAT ACGCTATTCG CAAGTGGCCC CTCTACGCAG ATTAATGCTC CTAAAGTTAA CGGTCTACCA CGTCCGTTCG CTAATGGAGG TATGCAGCCT GTCCCGATCC CGGCTCCACA TCCACCACCA CCACCACAAG TGTATCAAAC TCAGCCACCA TCTTGGCCTT CTCAGCCACA ACAACACGGC TTAGTGGTTC CACCACCGCC CATGCAATTC CGTCCGCCTC AAGGTCTGCA GCCGCAACCA CCACCTCCTC AGTTTCATCA TCACCAACAA GGTTTCGGTG TTCCAAGGCC GCCACCACCA TATCAAGCCA TGGGAATGCA CCAACATGGC TGGCCACTCC AACATATACA TCAAGGTGTA CCACCACCAC AACAACTACC TATGCACCAT CATCATCACA TGTCTATACC TCCACCACCA CCACCACACC AAGGTTGA 
Length1098
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17999460.. 18001402
Download Sequence
A.thaliana
AGI-codeAT2G18510.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[emb2444][embryo defective 2444]
Gene coexpression
MR
MR Locus Description
25.6905 Ahg486975 laccase 8
38.0263 Ahg486726 VANGUARD 1 homolog 2
48.2494 Ahg325337 response regulator 21
62.7694 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
65.6506 Ahg937171 lanosterol synthase 1
68.775 Ahg472103 RWP-RK domain-containing protein
75.1598 Ahg477951 GNS1/SUR4 membrane protein family
75.2662 Ahg471318 FAD-binding Berberine family protein
84.3208 Ahg937108
84.6227 Ahg477851 Plant invertase/pectin methylesterase inhibitor superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression