Annotation |
Description | jgi|Araly1|488445|fgenesh2_kg.6__1579__AT5G15948.1 |
Sequence |
AATATCTCAA ACTCGTTTCC TCTCTCTTTT CATCATTACC AAATCATAAG CGGCTCTCTT AATATTTAGG GTTTCGAGTT TTCTCAATCA CCTGATTAAG CAGGTTTTCG TTCGTTTCAT ATCTTGGATC AATTACAAGA GAATTATAAA CTCCGGATCG TGATCAATAT TCCTTTACAT AAAAAGCGTG AATGAGATTA TGATGGAATC GAAAGGTGGC AATAAGAAGT CAAGCACAAG TTCCTTATTT TACGAAGCAC CCCTTGGTTA CAGCATTGAA GACGTTCGTC CTTACGGTGG AATCAAGAAA TTCAAATCTT CTGTCTACTC TAACTGCGCT AAGAGGCCTT CCTGAGTACC AGCCAATTTC TTCCATAGCT TTTCAATTAC AACAATCTCC TTTTCATTTC AAAGCTCTGG TTCCCGATGA CCATGTCTGC TATTGGCTTC GAAGGCTACG AGAAGCGTCT TGAAGTTACT TTCTTTGAGC CTGGTCTCTT TCTTGACACT CAAGGTAAAG GTCTACGTGC CTTGACCAAA TCTCAGATCG ATGAGATTCT TCAACCAGCT GAGTGCACTA TCGTTTCATC TCTCTCGAAC GATCAGCTCG ACTCTTATGT TCTCTCTGAG TCCAGTCTCT TTATCTTCCC TTACAAGATT GTCATCAAAA CTTGCGGGAC TACTAAGCTC CTCCTCTCTA TTGAGCCACT CTTGAGGTTA GCTAGTGAGC TTTCTCTTGA CGTCAAGGCT GTGAGGTACA CTCGTGGAAG CTTCCTCTGT CCTGGAGGAC AACCATTCCC TCACCGCAAC TTCTCTGAAG AAGTCTCTGT GCTTGATGGT CACTTTGCTA AGTTGGGTTT GAGCAGTGTT GCGTACTTGA TGGGCAATGA CGATGAAACC AAGAAATGGC ATGTTTACTC TGCTTCTTCT GATAACAACA ACAACAACAA CAATGTCTAC ACTCTCGAGA TGTGTATGAC TGGTCTGGAC AAAGACAAGG CATCTGTCTT CTTCAAGAAC GAGTCAAGCT CAGCTGGTTC TATGACTGAT AACTCTGGCA TCAGAAAGAT ACTTCCTCAA TCCCAAATCT GTGACTTTGA GTTTGAGCCA TGTGGCTACT CAATGAACAG CATCGAAGGT GACGCAATCT CCACCATCCA TGTGACTCCA GAAGATGGTT TCAGCTACGC TAGCTTTGAT GCAGTGGGAT ACGATTTCAC AACCATGGAC TTGAGCCATC TGGTCTCAAA GGTACTAACT TGCTTCGAGC CAAAGCAATT CTCTGTAGCT GTCCACTCTA GCGTCGCACA AAATGGGTAT CACTCTGGTC TATGTGTTGA CCTAGACGAT TACGAATGCA GAGAGACAAC AATGGAGTCT CTAGGAGAAG AGAGAGGAAC AGTGATGTAT CAGAGGTTTG AGAAGCTTGG AAAGTATTGT GGTTCTCCGC GATCTACCTT GAAATGTGAG TGGAGCAGCA ACAGTAGCTG CAACAGCGAG GACGAGAAGG AGGAATAGGG AATCTAAAGC TCAAGTTTTT AATTTTGTTT TCTCGAATAA TTAATGTGTT ATGGATATTT TTTCTTCTTT TTTCCCTTAA ACCAGTGATT GATTGTCTCT GTGGTCTATG TGAATTCGGA TGATC |
Length | 1645 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_6: 6227057.. 6229162 |
Download Sequence |
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A.thaliana |
AGI-code | AT5G15948.1 |
Description | conserved peptide upstream open reading frame 10 |
TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF10 represents a conserved upstream opening reading frame relative to major ORF AT5G15950.1 |
Alias | [CPuORF10][conserved peptide upstream open reading frame 10] |
Gene coexpression |
MR |
MR | Locus | Description |
2.23607 |
Ahg470177 | Homeodomain-like superfamily protein |
4 |
Ahg476523 | B-box type zinc finger protein with CCT domain |
4.24264 |
Ahg931833 | arginine decarboxylase 1 |
4.89898 |
Ahg495528 | B-box type zinc finger family protein |
6 |
Ahg935667 | circadian clock associated 1 |
6.32456 |
Ahg494217 | tonoplast dicarboxylate transporter |
6.7082 |
Ahg477472 | CONSTANS-like 2 |
8.12404 |
Ahg477481 | conserved peptide upstream open reading frame 9 |
8.3666 |
Ahg485852 | |
8.77496 |
Ahg341087 | |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
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Growth Chamber expression |
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